CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G184100
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.009G184100
T202653_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G184100.1
GRAS
178
548
LKQILVACGQALHDDDMLTVTGLMHVLEKMVSVSGEPIQRLGAYVLEGLRARLESSGSNIYRALKCKEPTSSELMSYMHILFRICPYWKFAYTSGNVVIKEVLEYEGKIHIIDFQIAQGTQWMFLIAALAKRPGGPPSIRITGIDDSQSNHARGGGLHIVGQRLSEFAWSYNVSFEFHDAAMSGCEIQLEHLKVQPGEALAVNLPYVLHHMPDESVSIWNHRDRLLRLVKSLSPKVVTLTEQESNTNTSPFFSRYLETLDYYSAMFESIDVACPRDDKQRINAEQHCVARDIVNMIACEGPERVERHELHGKWRSRFMMAGFSQYPLISSVTVAVRDMLKEYDHNYRLEEREGALYLGWVNRAMATFSAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27529.m000047
Ricinus communis
27529.m000047
N
0.756
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.732
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.734
SapurV1A.0823s0110
Salix purpurea
SapurV1A.0823s0110
N
0.753
SapurV1A.0359s0250
Salix purpurea
SapurV1A.0359s0250
N
0.729
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.772
MDP0000254936
Malus domestica
MDP0000254936
N
0.707
Lus10017554.g
Linum usitatissimum
Lus10017554.g
N
0.751
Lus10000539.g
Linum usitatissimum
Lus10000539.g
N
0.745
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.843
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.798
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.734
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.775
mgf007403m
Mimulus guttatus
mgf007403m
N
0.705
Cucsa.044690
Cucumis sativus
Cucsa.044690
N
0.710
GLYMA07G39650
Glycine max
GLYMA07G39650
N
0.740
Pm012494
Prunus mume
Pm012494
N
0.724
Cla014623
Citrullus lanatus
Cla014623
N
0.707
Ca_20223
Cicer arietinum
Ca_20223
N
0.729
Ca_07887
Cicer arietinum
Ca_07887
N
0.707
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.734
TCM_030393
Theobroma cacao
TCM_030393
N
0.897
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.729
POPTR_0016s01110
Populus trichocarpa
POPTR_0016s01110
N
0.751
POPTR_0006s01720
Populus trichocarpa
POPTR_0006s01720
N
0.726
MTR_4g133660
Medicago truncatula
MTR_4g133660
N
0.718
GLYMA17G01150
Glycine max
GLYMA17G01150
N
0.737
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.748
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.745