CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_20223
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_20223
T201894_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_20223
GRAS
172
543
LKEVLLLCAQAVSDGDISTARGWMDNVLVKMVSVGGDPIQRLGAYLLEGLRARLESSGSLIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYLSANAVIAEAMANESRIHIIDFQIAQGTQWHLLIQALANRPGGPPFIRITGVDDSQSFHARGGGLQIVGERLSEFARSCGVPFEFNYAAMSGCEVQQQNLSVRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVASLKDDKKRISAEQNCVARDIVNMIACEGVERVERHEVFGKWRMRFSMAGFRQCALSSSVMDSAQNLLKDFNQNYRLEHKDGALCLGWMKRAMATFSAWQ
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g133660
Medicago truncatula
MTR_4g133660
N
0.883
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.851
GLYMA07G39650
Glycine max
GLYMA07G39650
N
0.846
GLYMA17G01150
Glycine max
GLYMA17G01150
N
0.835
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.803
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.789
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.789
Ca_07887
Cicer arietinum
Ca_07887
N
0.778
SCL13
Arabidopsis lyrata
fgenesh2_kg.7__2586__AT4G17230.1
N
0.763
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.748
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.748
TCM_030393
Theobroma cacao
TCM_030393
N
0.743
Cla014623
Citrullus lanatus
Cla014623
N
0.732
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.729
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.729
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.729
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.726
Cucsa.044690
Cucumis sativus
Cucsa.044690
N
0.718
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.713
Pm012494
Prunus mume
Pm012494
N
0.710
MDP0000254936
Malus domestica
MDP0000254936
N
0.710
MTR_2g026250
Medicago truncatula
MTR_2g026250
N
0.707
Lus10000539.g
Linum usitatissimum
Lus10000539.g
N
0.705
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.702
27529.m000047
Ricinus communis
27529.m000047
N
0.702