CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G140100
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.011G140100
T202665_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G140100.1
GRAS
102
475
ASRLLKECARAIYDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCFKTLTLVAEKSHCFDSARKLILKFQEVSPWTTFGHVAANGAILEALDGEPKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTANIVRSVMKEISQRMEKFARLMGVPFEFNVISGLNHLGQLTKEALGVVEDEAVAVNCMGALRRVPVEGRAAVIGMFRSLGPKVVTVVEEEADFSSTRYDFVKCFEECLRFYTVYFEMLEESFTPTSNEKLMLERECSRGIVRVLACDDDQDNEGERERRERGSQWSERLKEAFSSVGFSDDVVDDVKALLKRYKPGWALAQPYQNETGLYLTWKEEPVVWVSAWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava23439.valid.m1
Manihot esculenta
cassava23439.valid.m1
I
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
cassava13355.valid.m1
Manihot esculenta
cassava13355.valid.m1
N
cassava30341.valid.m1
Manihot esculenta
cassava30341.valid.m1
N
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
mgf013168m
Mimulus guttatus
mgf013168m
N
Aquca_015_00469
Aquilegia coerulea
Aquca_015_00469
N
Bostr.18351s0165
Boechera stricta
Bostr.18351s0165
N
Cagra.0805s0005
Capsella grandiflora
Cagra.0805s0005
N
Carubv10014350m.g
Capsella rubella
Carubv10014350m.g
N
Ciclev10029007m.g
Citrus clementina
Ciclev10029007m.g
N
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
29830.m001415
Ricinus communis
29830.m001415
N
Gorai.002G001900
Gossypium raimondii
Gorai.002G001900
N
Gorai.003G003900
Gossypium raimondii
Gorai.003G003900
N
Gorai.005G257800
Gossypium raimondii
Gorai.005G257800
N
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
MDP0000480581
Malus domestica
MDP0000480581
N
MDP0000868556
Malus domestica
MDP0000868556
N
orange1.1g023427m.g
Citrus sinensis
orange1.1g023427m.g
N
SapurV1A.0080s0480
Salix purpurea
SapurV1A.0080s0480
N
SapurV1A.0218s0020
Salix purpurea
SapurV1A.0218s0020
N
Thhalv10022800m.g
Eutrema salsugineum
Thhalv10022800m.g
N
chr3.CM0460.350.nd
Lotus japonicus
chr3.CM0460.350.nd
N
POPTR_0004s18860
Populus trichocarpa
POPTR_0004s18860
N
Bo3g092020
Brassica oleracea
Bo3g092020
N
Bo7g015050
Brassica oleracea
Bo7g015050
N
Bra002018
Brassica rapa
Bra002018
N
Bra013034
Brassica rapa
Bra013034
N
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
GLYMA11G10230
Glycine max
GLYMA11G10230
N
GLYMA12G02540
Glycine max
GLYMA12G02540
N
GRMZM2G126817
Zea mays
GRMZM2G126817
N
LPERR03G02450
Leersia perrieri
LPERR03G02450
N
MTR_4g075980
Medicago truncatula
MTR_4g075980
N
OMERI03G02480
Oryza meridionalis
OMERI03G02480
N
anac036
Arabidopsis thaliana
AT2G17040
N
POPTR_0009s14370
Populus trichocarpa
POPTR_0009s14370
N
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
Sb01g048130
Sorghum bicolor
Sb01g048130
N
TCM_006499
Theobroma cacao
TCM_006499
N
anac036
Vitis vinifera
VIT_03s0038g03410
N
VIT_04s0008g00150
Vitis vinifera
VIT_04s0008g00150
N
Ca_11128
Cicer arietinum
Ca_11128
N
Cla007018
Citrullus lanatus
Cla007018
N
Pm020961
Prunus mume
Pm020961
N
29797.m000353
Ricinus communis
29797.m000353
N