CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g048329m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g048329m.g
T202964_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g048329m
GRAS
219
591
LVHLLLAAAEKVGYQQFERASRLLSRCEWTAAARANPVQRIVFNFAAALRERIDRETGNFTAKEELGGIGNGMTLIDHGLGINPVFLTCYQRLPFHQVVYLTGAQAMIENVGNASKIHILDFEIRCGVQWTSLMQALAEREQRPIQLLKLTAVAFGNKEEVEVTGKSLASFAESLNLPFQFSVVCVTNFLEIKEQLFEIRNDESLIVYCPLMLRKMISCPSCLENLLGVIKKLNPSLMVVIEVEANHNSPSFVNRFIETLFFYSAYFDALEICLEKNTETRTAMEAIFNSGICNVVAMEGTERTVRNVKMDVWRAFFSRFRMVEIGLSDQSLYQANLVLKQLACGSSCTLDKNGKSLIVGWKGTPIHSLSVWK
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB12
Homo sapiens
ENSG00000204366
D
Zbtb12
Mus musculus
ENSMUSG00000049823
D
ENSPANG00000003484
Papio anubis
ENSPANG00000003484
I
XP_002943018
Xenopus tropicalis
XP_002943018
I
zbtb12.L
Xenopus laevis
XB-GENE-865454
I
Pvit_00817
Pogona vitticeps
Pvit_00817
I
Ogr11440
Ophisaurus gracilis
Ogr11440
I
Myotis_brandtii_ZBTB12_10007235
Myotis brandtii
Myotis_brandtii_ZBTB12_10007235
I
Alligator_sinensis_CCG007024.1
Alligator sinensis
Alligator_sinensis_CCG007024.1
I
ENSSTOG00000027411
Ictidomys tridecemlineatus
ENSSTOG00000027411
I
ZBTB12
Sus scrofa
ENSSSCG00000001421
I
ENSSHAG00000008383
Sarcophilus harrisii
ENSSHAG00000008383
I
Zbtb12
Rattus norvegicus
ENSRNOG00000000418
I
ZBTB12
Pteropus vampyrus
ENSPVAG00000005130
I
ZBTB12
Pan troglodytes
ENSPTRG00000017993
I
ZBTB12
Anolis carolinensis
ENSACAG00000011189
I
ZBTB12
Otolemur garnettii
ENSOGAG00000031042
I
ENSMPUG00000018357
Mustela putorius furo
ENSMPUG00000018357
I
ENSMODG00000015096
Monodelphis domestica
ENSMODG00000015096
I
ZBTB12
Microcebus murinus
ENSMICG00000003600
I
ENSLACG00000006007
Latimeria chalumnae
ENSLACG00000006007
I
ENSGGOG00000015638
Gorilla gorilla
ENSGGOG00000015638
I
ZBTB12
Felis catus
ENSFCAG00000031296
I
ZBTB12
Canis familiaris
ENSCAFG00000000674
I
ZBTB12
Bos taurus
ENSBTAG00000032031
I
ENSAMEG00000012921
Ailuropoda melanoleuca
ENSAMEG00000012921
I