CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.1012s0040
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.1012s0040
T203167_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1012s0040.1.p
GRAS
295
671
SKQTIIEAASAIYEGKTDVYPEILTRICQVANPRGNSEQRLMEYMLMALKSRVNYAEKTTVRELYSKKHVDATQSLYELSPCFKLGFMAANFAIIEATREQGHEMNRCSNGFHVVDFDIGQGGQYVNLLHALSGPQNLKPAIVKITAVAADSNGGEEEERLRLVGEKLRQLAQRLGLSLCFNVVSCGLSELSRESLRCEPEEALAVNFAFKLYRMPDESVSTENPRDELLRRVKGLAPRVVTIVEQELNTNTAPFMARVNESCSYYGALFDSIDSTVERESSERVKVEEGLGRTIINSVACEGRDRIERCEVFGKWRARMGMAGFEPKPMSHNVAESMKARLSLTNRVNPGFTVKEQAGGVCFGWKGKTLTVASAWR
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s07700
Populus trichocarpa
POPTR_0004s07700
N
0.819
POPTR_0017s01730
Populus trichocarpa
POPTR_0017s01730
N
0.901
TCM_015228
Theobroma cacao
TCM_015228
N
0.714
30169.m006225
Ricinus communis
30169.m006225
N
0.737
cassava18974.valid.m1
Manihot esculenta
cassava18974.valid.m1
N
0.726
cassava7265.valid.m1
Manihot esculenta
cassava7265.valid.m1
N
0.728
Gorai.006G050200
Gossypium raimondii
Gorai.006G050200
N
0.701
SapurV1A.0147s0170
Salix purpurea
SapurV1A.0147s0170
N
0.786