CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0147s0170
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0147s0170
T203130_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0147s0170.1.p
GRAS
283
658
SKHTVIEAASAIFEGKTDVYTEILTRVSLVSNPGGNSEQRLMGYMLTALKSRLNSAGNTCAMELYSKEHVDATQLLYELSPCFKLGFMAANLAIIDAAREHKQEANASSNGFHVVDFDIGHGGQYMNLLLALSGLQNSKPAIVKITAVASDSNGGEERLRPVGEMLSQLARRVGLNLGFKVVSCKLNELTRESLGCEQEEVLAVNFAFNLYRMPDESVSSTENLRDELLRRVKGLAPRVVTVVEQEMNTNTAPFMARVNESCSYYGALFDSIESTVERDSSERAKVEEGLGRRIVNSVACEGRDRVERCEVFGKWRARLGMAGFELKPLSQNIAELMKTRLNLANRVNPGFTVKEENGGVCFGWTGKTLTVASAWR
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s07700
Populus trichocarpa
POPTR_0004s07700
N
0.893
POPTR_0017s01730
Populus trichocarpa
POPTR_0017s01730
N
0.797
SapurV1A.1012s0040
Salix purpurea
SapurV1A.1012s0040
N
0.786
30169.m006225
Ricinus communis
30169.m006225
N
0.742
cassava18974.valid.m1
Manihot esculenta
cassava18974.valid.m1
N
0.712
cassava7265.valid.m1
Manihot esculenta
cassava7265.valid.m1
N
0.707
TCM_015228
Theobroma cacao
TCM_015228
N
0.703