chr2.CM0168.260.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr2.CM0168.260.nc T203273_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0168.260.nc GRAS 106 479

Links

Other GRAS family TFs
Other Lotus japonicus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G083500 Gossypium raimondii Gorai.008G083500 N 0.764
Cucsa.103160 Cucumis sativus Cucsa.103160 N 0.772
Aquca_060_00005 Aquilegia coerulea Aquca_060_00005 N 0.753
Ciclev10025470m.g Citrus clementina Ciclev10025470m.g N 0.759
Eucgr.I00704 Eucalyptus grandis Eucgr.I00704 N 0.750
evm.TU.supercontig_6.17 Carica papaya evm.TU.supercontig_6.17 N 0.783
gene05757-v1.0-hybrid Fragaria vesca gene05757-v1.0-hybrid N 0.769
Gorai.003G030400 Gossypium raimondii Gorai.003G030400 N 0.771
Gorai.007G223500 Gossypium raimondii Gorai.007G223500 N 0.734
cassava7505.valid.m1 Manihot esculenta cassava7505.valid.m1 N 0.767
MDP0000165587 Malus domestica MDP0000165587 N 0.783
MDP0000171602 Malus domestica MDP0000171602 N 0.772
MDP0000687763 Malus domestica MDP0000687763 N 0.783
MDP0000822651 Malus domestica MDP0000822651 N 0.783
MDP0000840369 Malus domestica MDP0000840369 N 0.783
orange1.1g035867m.g Citrus sinensis orange1.1g035867m.g N 0.766
SapurV1A.0461s0030 Salix purpurea SapurV1A.0461s0030 N 0.783
PK04147.1 Cannabis sativa PK04147.1 N 0.729
Solyc02g092370.1 Solanum lycopersicum Solyc02g092370.1 N 0.745
GLYMA05G22460 Glycine max GLYMA05G22460 N 0.788
GLYMA11G05110 Glycine max GLYMA11G05110 N 0.859
GLYMA17G17400 Glycine max GLYMA17G17400 N 0.785
MTR_4g097080 Medicago truncatula MTR_4g097080 N 0.736
MTR_5g015490 Medicago truncatula MTR_5g015490 N 0.815
PGSC0003DMG400021444 Solanum tuberosum PGSC0003DMG400021444 N 0.753
SHR Populus trichocarpa POPTR_0012s06430 N 0.767
PRUPE_ppa004454mg Prunus persica PRUPE_ppa004454mg N 0.772
GLYMA01G40180 Glycine max GLYMA01G40180 N 0.854
TCM_000801 Theobroma cacao TCM_000801 N 0.775
SHR Vitis vinifera VIT_07s0129g00030 N 0.764
Ca_02226 Cicer arietinum Ca_02226 N 0.811
Ca_09352 Cicer arietinum Ca_09352 N 0.728
Cla014238 Citrullus lanatus Cla014238 N 0.770
Pm002381 Prunus mume Pm002381 N 0.774
29661.m000923 Ricinus communis 29661.m000923 N 0.740
cassava32963.m1 Manihot esculenta cassava32963.m1 N 0.780