ENSAMEG00000011909 (Ailuropoda melanoleuca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMEG00000011909 T206933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.849 0.947
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.849 0.947
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.849 0.947
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.849 0.930
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.849 0.912
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.849 0.912
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.849 0.912
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.849 0.912
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.849 0.912
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.849 0.912
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.849 0.912
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.849 0.912
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.849 0.912
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.849 0.912
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.849 0.912
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.849 0.912
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.849 0.912
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.849 0.912
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.847 0.912
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.810 0.930
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.810 0.930
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.804 0.930
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.804 0.930
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.804 0.930
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.804 0.930
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.804 0.930
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.685 0.544
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.671 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000012540 Homeodomain 209 268

Links

Other Homeodomain family TFs
Other Ailuropoda melanoleuca TFs

434 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAD3 Homo sapiens ENSG00000166949 D
Smad3 Mus musculus ENSMUSG00000032402 D
smad3a Takifugu rubripes ENSTRUG00000016858 I
SMAR008230 Strigamia maritima SMAR008230 I
PHUM033930 Pediculus humanus PHUM033930 I
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I
ML011743a Mnemiopsis leidyi ML011743a I
LotgiG189014 Lottia gigantea LotgiG189014 I
L798_14024 Zootermopsis nevadensis L798_14024 I
ISCW001846 Ixodes scapularis ISCW001846 I
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I
smad3b Takifugu rubripes ENSTRUG00000014802 I
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I
SMAD2 Sorex araneus ENSSARG00000003487 I
Smad3 Rattus norvegicus ENSRNOG00000008620 I
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I
SMAD3 Pan troglodytes ENSPTRG00000007199 I
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I
PPAI005080 Phlebotomus papatasi PPAI005080 I
smad2.S Xenopus laevis XB-GENE-864923 I
smad3.L Xenopus laevis XB-GENE-864816 I
smad3 Xenopus tropicalis XB-GENE-481992 I
LDEC015977 Leptinotarsa decemlineata LDEC015977 I
CLEC004107 Cimex lectularius CLEC004107 I
AAB39329 Xenopus laevis AAB39329 I
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I
Tal_R011237 Tyto alba Tal_R011237 I
Tal_R001210 Tyto alba Tal_R001210 I
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I
Gfo_R012055 Geospiza fortis Gfo_R012055 I
Gfo_R005908 Geospiza fortis Gfo_R005908 I
ENSP00000332973 Macaca fascicularis ENSP00000332973 I
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I
Brh_R001115 Buceros rhinoceros Brh_R001115 I
Brh_R001114 Buceros rhinoceros Brh_R001114 I
Afo_R015053 Aptenodytes forsteri Afo_R015053 I
Aan_R005610 Calypte anna Aan_R005610 I
Aan_R002236 Calypte anna Aan_R002236 I
TriadG49742 Trichoplax adhaerens TriadG49742 I
SMAD3 Cavia porcellus ENSCPOG00000021314 I
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I
smad3b Gasterosteus aculeatus ENSGACG00000005092 I
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I
SMAD3 Echinops telfairi ENSETEG00000003356 I
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I
smad3a Danio rerio ENSDARG00000036096 I
smad3b Danio rerio ENSDARG00000010207 I
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I
SMAD3 Callithrix jacchus ENSCJAG00000002088 I
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I
SMAD3 Canis familiaris ENSCAFG00000017388 I
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I
CGI_10017370 Crassostrea gigas CGI_10017370 I
CapteG167863 Capitella teleta CapteG167863 I
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I
ACEP23524 Atta cephalotes ACEP23524 I
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I
SMAD3 Procavia capensis ENSPCAG00000008103 I
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I
smad3b Oryzias latipes ENSORLG00000006803 I
smad3a Oryzias latipes ENSORLG00000002207 I
SMAD3 Ochotona princeps ENSOPRG00000014996 I
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I
SMAD3 Otolemur garnettii ENSOGAG00000014217 I
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I
SMAD3 Monodelphis domestica ENSMODG00000009609 I
SMAD3 Macaca mulatta ENSMMUG00000015455 I
SMAD2 Microcebus murinus ENSMICG00000007882 I
SMAD3 Microcebus murinus ENSMICG00000006119 I
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I
GB42213 Apis mellifera GB42213 N