MLOC_18998 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_18998 T220680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.848 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_18998.1 Homeodomain 18 78

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS11G0705900 Oryza sativa OS11G0705900 N 0.000
Pavir.J39141 Panicum virgatum Pavir.J39141 N 0.000
Pavir.J31658 Panicum virgatum Pavir.J31658 N 0.000
TRIUR3_21533 Triticum urartu TRIUR3_21533 N 0.000
Traes_4DS_C7C37A73D Triticum aestivum Traes_4DS_C7C37A73D N 0.000
Traes_4DS_A5CD70F30 Triticum aestivum Traes_4DS_A5CD70F30 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_4BS_344A932261 Triticum aestivum Traes_4BS_344A932261 N 0.000
Traes_4BS_2EA81743E1 Triticum aestivum Traes_4BS_2EA81743E1 N 0.000
Traes_4AL_E769BB5A6 Triticum aestivum Traes_4AL_E769BB5A6 N 0.000
Traes_4AL_B2CACD56E Triticum aestivum Traes_4AL_B2CACD56E N 0.000
Traes_4AL_977AF4963 Triticum aestivum Traes_4AL_977AF4963 N 0.000
Si026116m.g Setaria italica Si026116m.g N 0.000
Sb05g027785 Sorghum bicolor Sb05g027785 N 0.000
BGIOSGA035743 Oryza indica BGIOSGA035743 N 0.000
ORUFI11G25560 Oryza rufipogon ORUFI11G25560 N 0.000
ORGLA11G0190400 Oryza glaberrima ORGLA11G0190400 N 0.000
ONIVA11G23200 Oryza nivara ONIVA11G23200 N 0.000
OGLUM11G22840 Oryza glumaepatula OGLUM11G22840 N 0.000
OBART11G23680 Oryza barthii OBART11G23680 N 0.000
MLOC_7746 Hordeum vulgare MLOC_7746 N 0.000
MLOC_5548 Hordeum vulgare MLOC_5548 N 0.000
LPERR11G20420 Leersia perrieri LPERR11G20420 N 0.000
GRMZM2G073823 Zea mays GRMZM2G073823 N 0.000
F775_08285 Aegilops tauschii F775_08285 N 0.000
F775_08284 Aegilops tauschii F775_08284 N 0.000
BRADI4G09190 Brachypodium distachyon BRADI4G09190 N 0.000
BRADI4G09180 Brachypodium distachyon BRADI4G09180 N 0.000