CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb05g027785
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb05g027785
T201356_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb05g027785.1
GRAS
243
637
LHALLLRCAQAVATDDRAAAQDLLAHIRRHSSATGDAAQRMAHCFAEGLEARLAGTGSRLYRSLMLRRTSVADFLRAYRLYMAACCCKKVAFTFSNKTIHDAVAVAGGASSRRRRRLHIVDYGLGYGFQWPGLLRSLAVMEGGPPELVRITGIDLPQPGFRPARQIEDTGRRLSDCARQLGVPFAFRGIAAKREDVSPEDLHIDPAAEVLVVISLCHFRLLADEIDIISGAAVAGPGRRRRPSPRDEVLGNIRRMRPDVFIHGVVSGGYGTTYFPTRFREAMFYYSAQFDLLDATVPRDSPERLLLERDIFGRAAMNVVACEGTDRVERPETYRQWQVRNQRAGLRQLPLEPHVVKVVMDKVKDNYHRDFVVDEDQRWLLHRWKGRVLYGLSTWV
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G073823
Zea mays
GRMZM2G073823
N
0.881
Traes_4AL_977AF4963
Triticum aestivum
Traes_4AL_977AF4963
N
0.847
Pavir.J31658
Panicum virgatum
Pavir.J31658
N
0.822
Pavir.J39141
Panicum virgatum
Pavir.J39141
N
0.822
Si026116m.g
Setaria italica
Si026116m.g
N
0.803
Traes_4DS_C7C37A73D
Triticum aestivum
Traes_4DS_C7C37A73D
N
0.743
OBART11G23680
Oryza barthii
OBART11G23680
N
0.741
OGLUM11G22840
Oryza glumaepatula
OGLUM11G22840
N
0.741
BGIOSGA035743
Oryza indica
BGIOSGA035743
N
0.739
ONIVA11G23200
Oryza nivara
ONIVA11G23200
N
0.739
OS11G0705900
Oryza sativa
OS11G0705900
N
0.739
ORGLA11G0190400
Oryza glaberrima
ORGLA11G0190400
N
0.738
ORUFI11G25560
Oryza rufipogon
ORUFI11G25560
N
0.738
Traes_4BS_2EA81743E1
Triticum aestivum
Traes_4BS_2EA81743E1
N
0.735
BRADI4G09180
Brachypodium distachyon
BRADI4G09180
N
0.732
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.728
F775_08285
Aegilops tauschii
F775_08285
N
0.727
F775_08284
Aegilops tauschii
F775_08284
N
0.724
OB11G28100
Oryza brachyantha
OB11G28100
N
0.724
Traes_4DS_A5CD70F30
Triticum aestivum
Traes_4DS_A5CD70F30
N
0.724
TRIUR3_21533
Triticum urartu
TRIUR3_21533
N
0.724
Traes_4BS_344A932261
Triticum aestivum
Traes_4BS_344A932261
N
0.722
BRADI4G09190
Brachypodium distachyon
BRADI4G09190
N
0.719
Traes_4AL_B2CACD56E
Triticum aestivum
Traes_4AL_B2CACD56E
N
0.704