OPUNC03G26670 (Oryza punctata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OPUNC03G26670 T221738_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.690 0.568
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.686 0.545
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.686 0.545
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.673 0.568
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.663 0.432
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.663 0.432
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.663 0.432
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.663 0.432
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.607 0.432
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.601 0.477
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC03G26670.1 Homeodomain 334 377

Links

Other Homeodomain family TFs
Other Oryza punctata TFs

1231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB03G31780 Oryza brachyantha OB03G31780 I 0.000
OS03G0437200 Oryza sativa OS03G0437200 I 0.000
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.000
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.000
OS12G0583700 Oryza sativa OS12G0583700 I 0.000
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.000
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.000
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.000
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.000
OBART03G22570 Oryza barthii OBART03G22570 I 0.000
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.000
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.000
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.000
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I 0.000
Ca_05641 Cicer arietinum Ca_05641 I 0.000
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.000
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.000
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I 0.000
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.000
Bo7g117320 Brassica oleracea Bo7g117320 I 0.000
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.000
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.000
OPUNC03G21190 Oryza punctata OPUNC03G21190 N 0.000
Si037516m.g Setaria italica Si037516m.g N 0.000
Si037343m.g Setaria italica Si037343m.g N 0.000
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.000
OS11G0340477 Oryza sativa OS11G0340477 N 0.000
PDK_20s1446781g002 Phoenix dactylifera PDK_20s1446781g002 N 0.000
OS03G0437100 Oryza sativa OS03G0437100 N 0.000
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.000
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.000
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.000
OBART03G22560 Oryza barthii OBART03G22560 N 0.000
OB03G31790 Oryza brachyantha OB03G31790 N 0.000
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.000
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N 0.000
GSMUA_Achr10G31400_001 Musa acuminata GSMUA_Achr10G31400_001 N 0.000
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.000
F775_12743 Aegilops tauschii F775_12743 N 0.000
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.000
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.000
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.000