PISMIDRAFT_174060 (Pisolithus microcarpus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PISMIDRAFT_174060 T222404_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.683 0.304
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.683 0.304
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.683 0.304
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.683 0.283
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.683 0.283
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.683 0.283
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.683 0.283
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.683 0.283
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.683 0.283
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.683 0.283
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.683 0.283
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.683 0.283
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK18909 Homeodomain 158 203

Links

Other Homeodomain family TFs
Other Pisolithus microcarpus TFs

1153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PBX1 Homo sapiens ENSG00000185630 D 0.000
Pbx1 Mus musculus ENSMUSG00000052534 D 0.000
ENSACAG00000003721 Anolis carolinensis ENSACAG00000003721 I 0.000
Brh_R010078 Buceros rhinoceros Brh_R010078 I 0.000
Myotis_brandtii_MIMI_L668_10004071 Myotis brandtii Myotis_brandtii_MIMI_L668_10004071 I 0.000
Ogr15448 Ophisaurus gracilis Ogr15448 I 0.000
fgenesh1_pg.C_scaffold_1001003 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1001003 I 0.000
nkx2-4 Xenopus tropicalis XB-GENE-487481 I 0.000
AEPI008243 Anopheles epiroticus AEPI008243 I 0.000
AMIN005749 Anopheles minimus AMIN005749 I 0.000
MDOA002143 Musca domestica MDOA002143 I 0.000
PPAI000859 Phlebotomus papatasi PPAI000859 I 0.000
A_00975 Schistosoma haematobium A_00975 I 0.000
ACOC_0000393801 Angiostrongylus costaricensis ACOC_0000393801 I 0.000
ANCCEY_11361 Ancylostoma ceylanicum ANCCEY_11361 I 0.000
BTMF_0000212801 Brugia timori BTMF_0000212801 I 0.604
D915_05491 Fasciola hepatica D915_05491 I 0.000
HmN_000400100 Hymenolepis microstoma HmN_000400100 I 0.000
MhA1_Contig138.frz3.gene24 Meloidogyne hapla MhA1_Contig138.frz3.gene24 I 0.000
PXEA_0001880101 Protopolystoma xenopodis PXEA_0001880101 I 0.000
SVUK_0000462001 Strongylus vulgaris SVUK_0000462001 I 0.000
PBX1 Oryzias latipes ENSORLG00000016702 I 0.000
CABZ01017151.1 Danio rerio ENSDARG00000104156 I 0.000
ENSGMOG00000006428 Gadus morhua ENSGMOG00000006428 I 0.000
ENSLACG00000016442 Latimeria chalumnae ENSLACG00000016442 I 0.000
ENSLOCG00000006841 Lepisosteus oculatus ENSLOCG00000006841 I 0.000
ENSMEUG00000002971 Macropus eugenii ENSMEUG00000002971 I 0.000
ENSMEUG00000003167 Macropus eugenii ENSMEUG00000003167 I 0.000
ENSMEUG00000006330 Macropus eugenii ENSMEUG00000006330 I 0.000
PBX4 Oryctolagus cuniculus ENSOCUG00000029208 I 0.000
UCRNP2_7717 Neofusicoccum parvum UCRNP2_7717 I 0.000
ENSSTOG00000013679 Ictidomys tridecemlineatus ENSSTOG00000013679 I 0.000
PBX3 Tupaia belangeri ENSTBEG00000016855 I 0.000
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I 0.000
MESCA000707 Megaselia scalaris MESCA000707 I 0.000
MYCFIDRAFT_76128 Pseudocercospora fijiensis MYCFIDRAFT_76128 I 0.000
ENSTBEG00000007209 Tupaia belangeri ENSTBEG00000007209 N 0.000
PK01458.1 Cannabis sativa PK01458.1 N 0.000
Lus10025232.g Linum usitatissimum Lus10025232.g N 0.000
L892_g18619 Steinernema scapterisci L892_g18619 N 0.000
ENSDORG00000008440 Dipodomys ordii ENSDORG00000008440 N 0.000
ORUFI07G17770 Oryza rufipogon ORUFI07G17770 N 0.000