VIT_13s0019g02450 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_13s0019g02450 T224557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.836 0.653
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.624 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.600 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.600 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.600 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.600 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g02450.t01 Homeodomain 325 376

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

985 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_01051 Trichinella nativa D917_01051 I 0.000
TC000483 Tribolium castaneum TC000483 I 0.000
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.000
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.000
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.000
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.000
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.000
CLEC007171 Cimex lectularius CLEC007171 I 0.000
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.000
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.000
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.000
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.000
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.000
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.000
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.000
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.000
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.000
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.000
NECAME_16530 Necator americanus NECAME_16530 I 0.000
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.000
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.000
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.000
T265_00628 Opisthorchis viverrini T265_00628 I 0.000
T265_02852 Opisthorchis viverrini T265_02852 I 0.000
T265_14002 Opisthorchis viverrini T265_14002 I 0.000
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.000
L798_06393 Zootermopsis nevadensis L798_06393 I 0.000
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.000
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.000
DLX3 Bos taurus ENSBTAG00000017409 I 0.000
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.000
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.000
EFV57629 Trichinella spiralis EFV57629 I 0.000
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.000
ADAC008104 Anopheles darlingi ADAC008104 I 0.000
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.000
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.000
ENSTSYG00000000516 Tarsius syrichta ENSTSYG00000000516 I 0.000
MCINX007054 Melitaea cinxia MCINX007054 I 0.000
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.000
GF12207 Drosophila ananassae FBgn0089246 I 0.000
GF13343 Drosophila ananassae FBgn0090375 I 0.000
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N 0.000
ENSAMEG00000004660 Ailuropoda melanoleuca ENSAMEG00000004660 N 0.000
TTAC_0001021101 Hydatigera taeniaeformis TTAC_0001021101 N 0.000
Dbx1 Dipodomys ordii ENSDORG00000009286 N 0.000
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N 0.000
DBX1 Echinops telfairi ENSETEG00000017576 N 0.000
DBX1 Gorilla gorilla ENSGGOG00000014848 N 0.000
HDID_0000333701 Hymenolepis diminuta HDID_0000333701 N 0.000
DBX1 Microcebus murinus ENSMICG00000017111 N 0.000
ENSNLEG00000017811 Nomascus leucogenys ENSNLEG00000017811 N 0.000
DBX1 Ochotona princeps ENSOPRG00000012954 N 0.000
DBX1 Procavia capensis ENSPCAG00000004905 N 0.000
ENSPPYG00000003422 Pongo abelii ENSPPYG00000003422 N 0.000
ASTEI06918 Anopheles stephensi ASTEI06918 N 0.000
DBX1 Pan troglodytes ENSPTRG00000003437 N 0.000
Ogr00185 Ophisaurus gracilis Ogr00185 N 0.000