WBGene00238147 (Onchocerca volvulus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 WBGene00238147 T224687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.751 0.413
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.751 0.413
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.751 0.413
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.751 0.413
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.751 0.413
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.751 0.413
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.751 0.413
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.751 0.413
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.751 0.413
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.662 0.239
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.662 0.239
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.662 0.239
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OVOC1338 Homeodomain 58 103

Links

Other Homeodomain family TFs
Other Onchocerca volvulus TFs

1226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.000
PK07653.1 Cannabis sativa PK07653.1 I 0.000
Ca_19588 Cicer arietinum Ca_19588 I 0.000
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.000
TCM_005483 Theobroma cacao TCM_005483 I 0.000
POPTR_0014s06750 Populus trichocarpa POPTR_0014s06750 I 0.000
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.000
Cla021612 Citrullus lanatus Cla021612 N 0.000
Pm017948 Prunus mume Pm017948 N 0.000
30174.m008910 Ricinus communis 30174.m008910 N 0.000
GLYMA01G34650 Glycine max GLYMA01G34650 N 0.000
cassava36905.valid.m1 Manihot esculenta cassava36905.valid.m1 N 0.000
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.000
gene19384-v1.0-hybrid Fragaria vesca gene19384-v1.0-hybrid N 0.000
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.000
Lus10009234.g Linum usitatissimum Lus10009234.g N 0.000
Lus10038002.g Linum usitatissimum Lus10038002.g N 0.000
MDP0000204597 Malus domestica MDP0000204597 N 0.000
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.000
GLYMA03G02500 Glycine max GLYMA03G02500 N 0.000