Ogr10509 (Ophisaurus gracilis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ogr10509 T226532_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.867 1.000
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.867 1.000
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.867 1.000
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.867 0.982
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.867 0.965
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.867 0.965
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.867 0.965
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.867 0.965
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.867 0.965
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.867 0.965
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.867 0.965
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.867 0.965
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.867 0.965
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.867 0.965
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.867 0.965
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.867 0.965
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.867 0.965
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.867 0.965
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.865 0.965
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.822 0.947
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.822 0.947
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.822 0.947
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.822 0.947
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.822 0.947
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.815 0.912
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.815 0.912
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.691 0.579
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.677 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr10509 Homeodomain 84 143

Links

Other Homeodomain family TFs
Other Ophisaurus gracilis TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTF1A Homo sapiens ENSG00000168267 D
Ptf1a Mus musculus ENSMUSG00000026735 D
Fer1 Drosophila melanogaster FBgn0037475 D
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I
AAEL008660 Aedes aegypti AAEL008660 I
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I
ADAC008497 Anopheles darlingi ADAC008497 I
AGAP001448 Anopheles gambiae AGAP001448 I
CapteG59283 Capitella teleta CapteG59283 I
CGI_10017809 Crassostrea gigas CGI_10017809 I
CPIJ006258 Culex quinquefasciatus CPIJ006258 I
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I
EFV58245 Trichinella spiralis EFV58245 I
PTF1A Anolis carolinensis ENSACAG00000008717 I
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I
PTF1A Bos taurus ENSBTAG00000047315 I
PTF1A Callithrix jacchus ENSCJAG00000007862 I
PTF1A Cavia porcellus ENSCPOG00000022828 I
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I
ptf1a Danio rerio ENSDARG00000014479 I
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I
PTF1A Equus caballus ENSECAG00000012711 I
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I
PTF1A Gorilla gorilla ENSGGOG00000015210 I
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I
PTF1A Loxodonta africana ENSLAFG00000012682 I
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I
PTF1A Myotis lucifugus ENSMLUG00000010122 I
PTF1A Monodelphis domestica ENSMODG00000008946 I
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I
PTF1A Otolemur garnettii ENSOGAG00000024685 I
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I
ptf1a Oryzias latipes ENSORLG00000008277 I
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I
PTF1A Procavia capensis ENSPCAG00000005440 I
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I
Ptf1a Rattus norvegicus ENSRNOG00000016902 I
PTF1A Sus scrofa ENSSSCG00000030662 I
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I
ptf1a Takifugu rubripes ENSTRUG00000007713 I
PTF1A Tursiops truncatus ENSTTRG00000016843 I
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I
GF17655 Drosophila ananassae FBgn0094673 I
GG13863 Drosophila erecta FBgn0106126 I
GH19006 Drosophila grimshawi FBgn0126473 I
GI23061 Drosophila mojavensis FBgn0145788 I
GL12422 Drosophila persimilis FBgn0150028 I
GM10936 Drosophila sechellia FBgn0165881 I
GD19915 Drosophila simulans FBgn0191398 I
GJ24574 Drosophila virilis FBgn0211653 I
GK14521 Drosophila willistoni FBgn0216527 I
GE24907 Drosophila yakuba FBgn0242002 I
GA27498 Drosophila pseudoobscura FBgn0248864 I
HelroG86431 Helobdella robusta HelroG86431 I
ISCW003737 Ixodes scapularis ISCW003737 I
KGM_14030 Danaus plexippus KGM_14030 I
L798_11980 Zootermopsis nevadensis L798_11980 I
LotgiG66849 Lottia gigantea LotgiG66849 I
MESCA008421 Megaselia scalaris MESCA008421 I
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I
PHUM498120 Pediculus humanus PHUM498120 I
RPRC001881 Rhodnius prolixus RPRC001881 I
SMAR009985 Strigamia maritima SMAR009985 I
SMAR011911 Strigamia maritima SMAR011911 I
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I
TC014105 Tribolium castaneum TC014105 I
YQE_02105 Dendroctonus ponderosae YQE_02105 I
Pvit_04136 Pogona vitticeps Pvit_04136 I
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I
CLEC012470 Cimex lectularius CLEC012470 I
LCUP002382 Lucilia cuprina LCUP002382 I
LDEC016362 Leptinotarsa decemlineata LDEC016362 I
SMU15024587 Schmidtea mediterranea SMU15024587 I
SMU15028020 Schmidtea mediterranea SMU15028020 I
SMU15033768 Schmidtea mediterranea SMU15033768 I
ptf1a Xenopus tropicalis XB-GENE-484425 I
ptf1a.S Xenopus laevis XB-GENE-6466546 I
AALB002674 Anopheles albimanus AALB002674 I
AARA001906 Anopheles arabiensis AARA001906 I
AATE014019 Anopheles atroparvus AATE014019 I
ACHR004799 Anopheles christyi ACHR004799 I
ACOM034154 Anopheles coluzzii ACOM034154 I
ACUA004590 Anopheles culicifacies ACUA004590 I
ADIR010545 Anopheles dirus ADIR010545 I
AEPI006242 Anopheles epiroticus AEPI006242 I
AFAF002909 Anopheles farauti AFAF002909 I
AFUN008310 Anopheles funestus AFUN008310 I
AMAM018725 Anopheles maculatus AMAM018725 I
AMEC009154 Anopheles melas AMEC009154 I
AMEM011331 Anopheles merus AMEM011331 I
AMIN003266 Anopheles minimus AMIN003266 I
AQUA006634 Anopheles quadriannulatus AQUA006634 I
ASIS019386 Anopheles sinensis ASIS019386 I
BGLB003958 Biomphalaria glabrata BGLB003958 I
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I
MDOA013156 Musca domestica MDOA013156 I
PPAI005132 Phlebotomus papatasi PPAI005132 I
csin111295 Clonorchis sinensis csin111295 I
D915_00775 Fasciola hepatica D915_00775 I
D917_00545 Trichinella nativa D917_00545 I
D918_01499 Trichuris suis D918_01499 I
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I
HmN_000218700 Hymenolepis microstoma HmN_000218700 I
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I
T265_12589 Opisthorchis viverrini T265_12589 I
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I