CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_03339
(
Pogona vitticeps
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Pvit_03339
T226711_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_03339
Homeodomain
765
812
EARKTFLTKYFNKQPYPSRREIEKLAASLWLWKSDIASHFSNKRKKCV
Links
Other
Homeodomain
family TFs
Other
Pogona vitticeps
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TGA6
Arabidopsis thaliana
AT3G12250
D
0.000
TGA2
Arabidopsis thaliana
AT5G06950
D
0.000
TGA5
Arabidopsis thaliana
AT5G06960
D
0.000
HBP1B_WHEAT
Triticum aestivum
HBP1B_WHEAT
D
0.000
PK09021.1
Cannabis sativa
PK09021.1
D
0.000
AMTR_s00031p00017860
Amborella trichopoda
AMTR_s00031p00017860
I
0.000
BGIOSGA000624
Oryza indica
BGIOSGA000624
I
0.000
BGIOSGA003265
Oryza indica
BGIOSGA003265
I
0.000
Bo1g139470
Brassica oleracea
Bo1g139470
I
0.000
Bo2g007460
Brassica oleracea
Bo2g007460
I
0.000
Bo3g064830
Brassica oleracea
Bo3g064830
I
0.000
Bo5g133550
Brassica oleracea
Bo5g133550
I
0.000
Bo9g175710
Brassica oleracea
Bo9g175710
I
0.000
Bra001443
Brassica rapa
Bra001443
I
0.000
Bra009241
Brassica rapa
Bra009241
I
0.000
Bra028713
Brassica rapa
Bra028713
I
0.000
Bra034767
Brassica rapa
Bra034767
I
0.000
Bra038705
Brassica rapa
Bra038705
I
0.000
BRADI2G10830
Brachypodium distachyon
BRADI2G10830
I
0.000
TGA6
Arabidopsis lyrata
fgenesh2_kg.3__1288__AT3G12250.4
I
0.000
OBF5
Arabidopsis lyrata
fgenesh2_kg.6__648__AT5G06960.1
I
0.000
GLYMA03G28320
Glycine max
GLYMA03G28320
I
0.000
GLYMA11G19026
Glycine max
GLYMA11G19026
I
0.000
GLYMA12G09430
Glycine max
GLYMA12G09430
I
0.000
GLYMA13G26280
Glycine max
GLYMA13G26280
I
0.000
GLYMA15G37220
Glycine max
GLYMA15G37220
I
0.000
GLYMA19G31050
Glycine max
GLYMA19G31050
I
0.000
GLYMA20G39050
Glycine max
GLYMA20G39050
I
0.000
GRMZM2G019907
Zea mays
GRMZM2G019907
I
0.000
GRMZM2G030280
Zea mays
GRMZM2G030280
I
0.000
GRMZM2G125243
Zea mays
GRMZM2G125243
I
0.000
GSMUA_Achr10G00340_001
Musa acuminata
GSMUA_Achr10G00340_001
I
0.000
GSMUA_Achr11G25140_001
Musa acuminata
GSMUA_Achr11G25140_001
I
0.000
GSMUA_Achr2G06770_001
Musa acuminata
GSMUA_Achr2G06770_001
I
0.000
GSMUA_Achr3G11150_001
Musa acuminata
GSMUA_Achr3G11150_001
I
0.000
GSMUA_Achr3G25020_001
Musa acuminata
GSMUA_Achr3G25020_001
I
0.000
GSMUA_Achr8G05800_001
Musa acuminata
GSMUA_Achr8G05800_001
I
0.000
GSMUA_Achr8G21670_001
Musa acuminata
GSMUA_Achr8G21670_001
I
0.000
LPERR01G10700
Leersia perrieri
LPERR01G10700
I
0.000
MLOC_14596
Hordeum vulgare
MLOC_14596
I
0.000
MTR_2g086420
Medicago truncatula
MTR_2g086420
I
0.000
MTR_4g053250
Medicago truncatula
MTR_4g053250
I
0.000
MTR_7g089800
Medicago truncatula
MTR_7g089800
I
0.000
MTR_8g040120
Medicago truncatula
MTR_8g040120
I
0.000
OB01G21470
Oryza brachyantha
OB01G21470
I
0.000
OB01G43330
Oryza brachyantha
OB01G43330
I
0.000
OBART01G11380
Oryza barthii
OBART01G11380
I
0.000
OBART01G34430
Oryza barthii
OBART01G34430
I
0.000
OGLUM01G20660
Oryza glumaepatula
OGLUM01G20660
I
0.000
OLONG_020675
Oryza longistaminata
OLONG_020675
I
0.000
OMERI01G31730
Oryza meridionalis
OMERI01G31730
I
0.000
ONIVA01G13810
Oryza nivara
ONIVA01G13810
I
0.000
ONIVA01G39320
Oryza nivara
ONIVA01G39320
I
0.000
OPUNC01G11270
Oryza punctata
OPUNC01G11270
I
0.000
OPUNC01G33450
Oryza punctata
OPUNC01G33450
I
0.000
ORUFI01G12420
Oryza rufipogon
ORUFI01G12420
I
0.000
ORUFI01G37800
Oryza rufipogon
ORUFI01G37800
I
0.000
TGA2.3
Oryza sativa
OS01G0279900
I
0.000
OS01G0808100
Oryza sativa
OS01G0808100
I
0.000
PGSC0003DMG400009449
Solanum tuberosum
PGSC0003DMG400009449
I
0.000
PGSC0003DMG402023696
Solanum tuberosum
PGSC0003DMG402023696
I
0.000
POPTR_0001s06700
Populus trichocarpa
POPTR_0001s06700
I
0.000
POPTR_0004s21360
Populus trichocarpa
POPTR_0004s21360
I
0.000
POPTR_0006s03720
Populus trichocarpa
POPTR_0006s03720
I
0.000
PAN
Populus trichocarpa
POPTR_0008s11710
I
0.000
POPTR_0009s16590
Populus trichocarpa
POPTR_0009s16590
I
0.000
POPTR_0016s03590
Populus trichocarpa
POPTR_0016s03590
I
0.000
PRUPE_ppa003825mg
Prunus persica
PRUPE_ppa003825mg
I
0.000
PRUPE_ppa004537mg
Prunus persica
PRUPE_ppa004537mg
I
0.000
PRUPE_ppa005279mg
Prunus persica
PRUPE_ppa005279mg
I
0.000
Sb03g006790
Sorghum bicolor
Sb03g006790
I
0.000
Sb03g037560
Sorghum bicolor
Sb03g037560
I
0.000
Sb04g006500
Sorghum bicolor
Sb04g006500
I
0.000
Si001292m.g
Setaria italica
Si001292m.g
I
0.000
Si002195m.g
Setaria italica
Si002195m.g
I
0.000
Solyc10g080770.1
Solanum lycopersicum
Solyc10g080770.1
I
0.000
Solyc11g064950.1
Solanum lycopersicum
Solyc11g064950.1
I
0.000
TCM_011845
Theobroma cacao
TCM_011845
I
0.000
TCM_023491
Theobroma cacao
TCM_023491
I
0.000
TCM_023492
Theobroma cacao
TCM_023492
I
0.000
TCM_024862
Theobroma cacao
TCM_024862
I
0.000
TCM_041421
Theobroma cacao
TCM_041421
I
0.000
TRAES3BF003000030CFD_g
Triticum aestivum
TRAES3BF003000030CFD_g
I
0.000
Traes_7DS_E5A18AAA4
Triticum aestivum
Traes_7DS_E5A18AAA4
I
0.000
TRIUR3_33475
Triticum urartu
TRIUR3_33475
I
0.000
PAN
Vitis vinifera
VIT_01s0011g03230
I
0.000
TGA9
Vitis vinifera
VIT_06s0080g00360
I
0.000
VIT_08s0007g05170
Vitis vinifera
VIT_08s0007g05170
I
0.000
TGA10
Vitis vinifera
VIT_08s0007g06160
I
0.000
VIT_13s0084g00660
Vitis vinifera
VIT_13s0084g00660
I
0.000
Ca_07057
Cicer arietinum
Ca_07057
I
0.000
Ca_07170
Cicer arietinum
Ca_07170
I
0.000
Ca_10901
Cicer arietinum
Ca_10901
I
0.000
Ca_17971
Cicer arietinum
Ca_17971
I
0.000
Cla002918
Citrullus lanatus
Cla002918
I
0.000
Cla008794
Citrullus lanatus
Cla008794
I
0.000
Cla010092
Citrullus lanatus
Cla010092
I
0.000
Cla017796
Citrullus lanatus
Cla017796
I
0.000
Cla022393
Citrullus lanatus
Cla022393
I
0.000
Pm001317
Prunus mume
Pm001317
I
0.000
Pm016643
Prunus mume
Pm016643
I
0.000
Pm025995
Prunus mume
Pm025995
I
0.000
Pm028917
Prunus mume
Pm028917
I
0.000
29216.m000249
Ricinus communis
29216.m000249
I
0.000
30131.m007163
Ricinus communis
30131.m007163
I
0.000
cassava13378.valid.m1
Manihot esculenta
cassava13378.valid.m1
I
0.000
cassava1426.valid.m1
Manihot esculenta
cassava1426.valid.m1
I
0.000
cassava1427.valid.m1
Manihot esculenta
cassava1427.valid.m1
I
0.000
cassava22236.valid.m1
Manihot esculenta
cassava22236.valid.m1
I
0.000
cassava22237.valid.m1
Manihot esculenta
cassava22237.valid.m1
I
0.000
cassava6928.valid.m1
Manihot esculenta
cassava6928.valid.m1
I
0.000
Cucsa.005120
Cucumis sativus
Cucsa.005120
I
0.000
Cucsa.199800
Cucumis sativus
Cucsa.199800
I
0.000
Cucsa.242870
Cucumis sativus
Cucsa.242870
I
0.000
Cucsa.307820
Cucumis sativus
Cucsa.307820
I
0.000
Cucsa.337740
Cucumis sativus
Cucsa.337740
I
0.000
mgf001395m
Mimulus guttatus
mgf001395m
I
0.000
mgf005858m
Mimulus guttatus
mgf005858m
I
0.000
mgf025345m
Mimulus guttatus
mgf025345m
I
0.000
Aquca_004_00127
Aquilegia coerulea
Aquca_004_00127
I
0.000
Aquca_004_00791
Aquilegia coerulea
Aquca_004_00791
I
0.000
Aquca_009_00172
Aquilegia coerulea
Aquca_009_00172
I
0.000
Aquca_009_00424
Aquilegia coerulea
Aquca_009_00424
I
0.000
Aquca_072_00138
Aquilegia coerulea
Aquca_072_00138
I
0.000
Bostr.13129s0278
Boechera stricta
Bostr.13129s0278
I
0.000
Bostr.13129s0279
Boechera stricta
Bostr.13129s0279
I
0.000
Bostr.3640s0002
Boechera stricta
Bostr.3640s0002
I
0.000
Cagra.0430s0055
Capsella grandiflora
Cagra.0430s0055
I
0.000
Cagra.16209s0003
Capsella grandiflora
Cagra.16209s0003
I
0.000
Cagra.16209s0004
Capsella grandiflora
Cagra.16209s0004
I
0.000
Carubv10001409m.g
Capsella rubella
Carubv10001409m.g
I
0.000
Carubv10001413m.g
Capsella rubella
Carubv10001413m.g
I
0.000
Ciclev10001081m.g
Citrus clementina
Ciclev10001081m.g
I
0.000
Ciclev10005080m.g
Citrus clementina
Ciclev10005080m.g
I
0.000
Ciclev10031361m.g
Citrus clementina
Ciclev10031361m.g
I
0.000
Eucgr.A02240
Eucalyptus grandis
Eucgr.A02240
I
0.000
Eucgr.B03855
Eucalyptus grandis
Eucgr.B03855
I
0.000
Eucgr.G03217
Eucalyptus grandis
Eucgr.G03217
I
0.000
Eucgr.J00491
Eucalyptus grandis
Eucgr.J00491
I
0.000
Eucgr.K01643
Eucalyptus grandis
Eucgr.K01643
I
0.000
evm.TU.supercontig_1.202
Carica papaya
evm.TU.supercontig_1.202
I
0.000
evm.TU.supercontig_32.14
Carica papaya
evm.TU.supercontig_32.14
I
0.000
evm.TU.supercontig_5.165
Carica papaya
evm.TU.supercontig_5.165
I
0.000
evm.TU.supercontig_847.1
Carica papaya
evm.TU.supercontig_847.1
I
0.000
evm.TU.supercontig_85.93
Carica papaya
evm.TU.supercontig_85.93
I
0.000
gene00517-v1.0-hybrid
Fragaria vesca
gene00517-v1.0-hybrid
I
0.000
gene21797-v1.0-hybrid
Fragaria vesca
gene21797-v1.0-hybrid
I
0.000
gene21882-v1.0-hybrid
Fragaria vesca
gene21882-v1.0-hybrid
I
0.000
Gorai.001G122100
Gossypium raimondii
Gorai.001G122100
I
0.000
Gorai.002G228200
Gossypium raimondii
Gorai.002G228200
I
0.000
Gorai.006G111800
Gossypium raimondii
Gorai.006G111800
I
0.000
Gorai.006G141000
Gossypium raimondii
Gorai.006G141000
I
0.000
Gorai.007G352600
Gossypium raimondii
Gorai.007G352600
I
0.000
Gorai.008G185000
Gossypium raimondii
Gorai.008G185000
I
0.000
Gorai.011G217200
Gossypium raimondii
Gorai.011G217200
I
0.000
Gorai.013G001700
Gossypium raimondii
Gorai.013G001700
I
0.000
Gorai.013G081100
Gossypium raimondii
Gorai.013G081100
I
0.000
Lus10008658.g
Linum usitatissimum
Lus10008658.g
I
0.000
Lus10024140.g
Linum usitatissimum
Lus10024140.g
I
0.000
Lus10026166.g
Linum usitatissimum
Lus10026166.g
I
0.000
Lus10034296.g
Linum usitatissimum
Lus10034296.g
I
0.000
Lus10041475.g
Linum usitatissimum
Lus10041475.g
I
0.000
MDP0000262210
Malus domestica
MDP0000262210
I
0.000
MDP0000300532
Malus domestica
MDP0000300532
I
0.000
MDP0000307943
Malus domestica
MDP0000307943
I
0.000
MDP0000320322
Malus domestica
MDP0000320322
I
0.000
MDP0000320524
Malus domestica
MDP0000320524
I
0.000
MDP0000536881
Malus domestica
MDP0000536881
I
0.000
orange1.1g015258m.g
Citrus sinensis
orange1.1g015258m.g
I
0.000
orange1.1g038233m.g
Citrus sinensis
orange1.1g038233m.g
I
0.000
orange1.1g045786m.g
Citrus sinensis
orange1.1g045786m.g
I
0.000
Pavir.Eb01160
Panicum virgatum
Pavir.Eb01160
I
0.000
Pavir.Eb03507
Panicum virgatum
Pavir.Eb03507
I
0.000
SapurV1A.0018s0400
Salix purpurea
SapurV1A.0018s0400
I
0.000
SapurV1A.0079s0330
Salix purpurea
SapurV1A.0079s0330
I
0.000
SapurV1A.0125s0260
Salix purpurea
SapurV1A.0125s0260
I
0.000
SapurV1A.0189s0240
Salix purpurea
SapurV1A.0189s0240
I
0.000
SapurV1A.0196s0260
Salix purpurea
SapurV1A.0196s0260
I
0.000
SapurV1A.0374s0050
Salix purpurea
SapurV1A.0374s0050
I
0.000
SapurV1A.1761s0020
Salix purpurea
SapurV1A.1761s0020
I
0.000
Thhalv10014082m.g
Eutrema salsugineum
Thhalv10014082m.g
I
0.000
Thhalv10021187m.g
Eutrema salsugineum
Thhalv10021187m.g
I
0.000
PK07387.1
Cannabis sativa
PK07387.1
I
0.000
PK13754.1
Cannabis sativa
PK13754.1
I
0.000
PK21698.1
Cannabis sativa
PK21698.1
I
0.000
chr1.CM0009.80.nd
Lotus japonicus
chr1.CM0009.80.nd
I
0.000
PDK_20s1462851g003
Phoenix dactylifera
PDK_20s1462851g003
I
0.000
F775_05299
Aegilops tauschii
F775_05299
N
0.000
GSMUA_Achr10G10300_001
Musa acuminata
GSMUA_Achr10G10300_001
N
0.000
GSMUA_Achr11G26170_001
Musa acuminata
GSMUA_Achr11G26170_001
N
0.000
MLOC_17690
Hordeum vulgare
MLOC_17690
N
0.000
Traes_4AL_5E7F93445
Triticum aestivum
Traes_4AL_5E7F93445
N
0.000
Traes_4BS_B7A8F8CD8
Triticum aestivum
Traes_4BS_B7A8F8CD8
N
0.000
Traes_4DS_0521C8ABF
Triticum aestivum
Traes_4DS_0521C8ABF
N
0.000
Ca_16486
Cicer arietinum
Ca_16486
N
0.000
cassava13449.valid.m1
Manihot esculenta
cassava13449.valid.m1
N
0.000
Cucsa.365420
Cucumis sativus
Cucsa.365420
N
0.000
Cucsa.385130
Cucumis sativus
Cucsa.385130
N
0.000
mgf016030m
Mimulus guttatus
mgf016030m
N
0.000
Gorai.009G086200
Gossypium raimondii
Gorai.009G086200
N
0.000