CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG402023696
(
Solanum tuberosum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
PGSC0003DMG402023696
T066544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.788
0.683
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.788
0.683
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.788
0.683
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400060926
bZIP
145
204
DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQGKYISNMADQS
Links
Other
bZIP
family TFs
Other
Solanum tuberosum
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc10g080770.1
Solanum lycopersicum
Solyc10g080770.1
I
0.859
POPTR_0004s21360
Populus trichocarpa
POPTR_0004s21360
I
0.804
SapurV1A.0125s0260
Salix purpurea
SapurV1A.0125s0260
I
0.804
MTR_4g053250
Medicago truncatula
MTR_4g053250
I
0.803
Aquca_004_00127
Aquilegia coerulea
Aquca_004_00127
I
0.803
Cucsa.199800
Cucumis sativus
Cucsa.199800
I
0.800
Aquca_072_00138
Aquilegia coerulea
Aquca_072_00138
I
0.798
POPTR_0009s16590
Populus trichocarpa
POPTR_0009s16590
I
0.794
30055.m001550
Ricinus communis
30055.m001550
I
0.794
cassava13378.valid.m1
Manihot esculenta
cassava13378.valid.m1
I
0.794
Cucsa.365420
Cucumis sativus
Cucsa.365420
N
0.794
Lus10034296.g
Linum usitatissimum
Lus10034296.g
I
0.794
Lus10041475.g
Linum usitatissimum
Lus10041475.g
I
0.794
SapurV1A.0374s0050
Salix purpurea
SapurV1A.0374s0050
I
0.794
AMTR_s00031p00017860
Amborella trichopoda
AMTR_s00031p00017860
I
0.793
GLYMA11G19026
Glycine max
GLYMA11G19026
I
0.793
GLYMA12G09430
Glycine max
GLYMA12G09430
I
0.793
MTR_2g086420
Medicago truncatula
MTR_2g086420
I
0.793
PRUPE_ppa004537mg
Prunus persica
PRUPE_ppa004537mg
I
0.793
TCM_041421
Theobroma cacao
TCM_041421
I
0.793
TGA9
Vitis vinifera
VIT_06s0080g00360
I
0.793
Ca_07057
Cicer arietinum
Ca_07057
I
0.793
Ca_16486
Cicer arietinum
Ca_16486
N
0.793
Cla008794
Citrullus lanatus
Cla008794
I
0.793
Pm001317
Prunus mume
Pm001317
I
0.793
mgf001395m
Mimulus guttatus
mgf001395m
I
0.793
Eucgr.J00491
Eucalyptus grandis
Eucgr.J00491
I
0.793
evm.TU.supercontig_32.14
Carica papaya
evm.TU.supercontig_32.14
I
0.793
gene21797-v1.0-hybrid
Fragaria vesca
gene21797-v1.0-hybrid
I
0.793
Gorai.006G111800
Gossypium raimondii
Gorai.006G111800
I
0.793
Gorai.009G086200
Gossypium raimondii
Gorai.009G086200
N
0.793
PK07387.1
Cannabis sativa
PK07387.1
I
0.793
Sb04g006500
Sorghum bicolor
Sb04g006500
I
0.792
GSMUA_Achr10G10300_001
Musa acuminata
GSMUA_Achr10G10300_001
N
0.790
F775_05299
Aegilops tauschii
F775_05299
N
0.789
GSMUA_Achr2G06770_001
Musa acuminata
GSMUA_Achr2G06770_001
I
0.789
MLOC_17690
Hordeum vulgare
MLOC_17690
N
0.789
PGSC0003DMG400012962
Solanum tuberosum
PGSC0003DMG400012962
I
0.789
POPTR_0003s19410
Populus trichocarpa
POPTR_0003s19410
I
0.789
PRUPE_ppa019842mg
Prunus persica
PRUPE_ppa019842mg
I
0.789
Solyc05g009660.2
Solanum lycopersicum
Solyc05g009660.2
I
0.789
Traes_4AL_5E7F93445
Triticum aestivum
Traes_4AL_5E7F93445
N
0.789
Traes_4BS_B7A8F8CD8
Triticum aestivum
Traes_4BS_B7A8F8CD8
N
0.789
Traes_4DS_0521C8ABF
Triticum aestivum
Traes_4DS_0521C8ABF
N
0.789
Pm029028
Prunus mume
Pm029028
I
0.789
gene14220-v1.0-hybrid
Fragaria vesca
gene14220-v1.0-hybrid
I
0.789
MDP0000145555
Malus domestica
MDP0000145555
I
0.789
MDP0000250967
Malus domestica
MDP0000250967
I
0.789
MDP0000301884
Malus domestica
MDP0000301884
I
0.789
SapurV1A.0009s1200
Salix purpurea
SapurV1A.0009s1200
I
0.789
SapurV1A.0574s0080
Salix purpurea
SapurV1A.0574s0080
I
0.789
PK08582.1
Cannabis sativa
PK08582.1
I
0.789
TGA9
Arabidopsis thaliana
AT1G08320
D
0.788
Bo5g008940
Brassica oleracea
Bo5g008940
I
0.788
Bo8g112540
Brassica oleracea
Bo8g112540
I
0.788
Bra018634
Brassica rapa
Bra018634
I
0.788
Bra031622
Brassica rapa
Bra031622
I
0.788
fgenesh1_pm.C_scaffold_1000665
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1000665
I
0.788
Solyc06g074320.2
Solanum lycopersicum
Solyc06g074320.2
I
0.788
Bostr.25219s0112
Boechera stricta
Bostr.25219s0112
I
0.788
Cagra.4395s0022
Capsella grandiflora
Cagra.4395s0022
I
0.788
Carubv10011576m.g
Capsella rubella
Carubv10011576m.g
I
0.788
Thhalv10007490m.g
Eutrema salsugineum
Thhalv10007490m.g
I
0.788
BGIOSGA007726
Oryza indica
BGIOSGA007726
I
0.787
OBART02G07230
Oryza barthii
OBART02G07230
I
0.787
OGLUM02G07240
Oryza glumaepatula
OGLUM02G07240
I
0.787
OLONG_010393
Oryza longistaminata
OLONG_010393
I
0.787
OMERI02G08300
Oryza meridionalis
OMERI02G08300
I
0.787
ONIVA02G08860
Oryza nivara
ONIVA02G08860
I
0.787
OPUNC02G06400
Oryza punctata
OPUNC02G06400
I
0.787
ORGLA02G0067600
Oryza glaberrima
ORGLA02G0067600
I
0.787
GSMUA_Achr11G26170_001
Musa acuminata
GSMUA_Achr11G26170_001
N
0.786
GSMUA_Achr9G27700_001
Musa acuminata
GSMUA_Achr9G27700_001
I
0.784
Eucgr.A02436
Eucalyptus grandis
Eucgr.A02436
I
0.784
Pavir.J04905
Panicum virgatum
Pavir.J04905
I
0.784
Pavir.J27823
Panicum virgatum
Pavir.J27823
I
0.784
Pavir.Ea03760
Panicum virgatum
Pavir.Ea03760
N
0.782