Cucsa.087050 (Cucumis sativus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cucsa.087050 T227174_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.668 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.087050.1 Homeodomain 21 77
Cucsa.087050.2 Homeodomain 13 69
Cucsa.087050.3 Homeodomain 13 69
Cucsa.087050.4 Homeodomain 13 69

Links

Other Homeodomain family TFs
Other Cucumis sativus TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CY34DRAFT_590075 Suillus luteus CY34DRAFT_590075 I 0.000
DACRYDRAFT_20822 Dacryopinax sp DACRYDRAFT_20822 I 0.000
MELLADRAFT_118331 Melampsora laricipopulina MELLADRAFT_118331 I 0.000
PAXRUDRAFT_830673 Paxillus rubicundulus PAXRUDRAFT_830673 I 0.000
SERLA73DRAFT_72478 Serpula lacrymans SERLA73DRAFT_72478 I 0.000
BOTBODRAFT_25699 Botryobasidium botryosum BOTBODRAFT_25699 N 0.000
FOMPIDRAFT_1127908 Fomitopsis pinicola FOMPIDRAFT_1127908 N 0.000
MVLG_05637 Microbotryum violaceum MVLG_05637 N 0.000
gw1.1.790.1 Sporobolomyces roseus gw1.1.790.1 N 0.000