CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

estExt_GenewiseH_1.C_530082 *(Branchiostoma floridae)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	estExt_GenewiseH_1.C_530082	T227431_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Dll M02112_2.00	Drosophila melanogaster	NVTAATTANN	NNTAATTABN	PBM Weirauch et al.(2014) pTH5506	0.855	0.947
Dll M03777_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Dll_1	0.855	0.947
Dll M03778_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Dll_2	0.855	0.947
Dll M06479_2.00	Drosophila melanogaster	TAATTDB	VHAATTA	B1H Mathelier et al.(2014) MA0187.1	0.855	0.947
Dll M06217_2.00	Drosophila melanogaster	TAATTDB	VHAATTA	B1H Zhu et al.(2011) Dll_Cell_FBgn0000157	0.855	0.947
Dll M06218_2.00	Drosophila melanogaster	TAATKR	YMATTA	B1H Zhu et al.(2011) Dll_SOLEXA_FBgn0000157	0.855	0.947
DLX4 M03112_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX4_1	0.852	0.877
DLX4 M05002_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX4_eDBD_HT-SELEX	0.852	0.877
DLX4 M05005_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX4_FL_HT-SELEX	0.852	0.877
DLX4 M05003_2.00	Homo sapiens	NTAAYRAB	VTYRTTAN	SELEX Yin et al.(2017) DLX4_eDBD_Methyl-HT-SELEX_1	0.852	0.877
DLX4 M05004_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX4_eDBD_Methyl-HT-SELEX_2	0.852	0.877
DLX4 M05006_2.00	Homo sapiens	NTAAYKAB	VTMRTTAN	SELEX Yin et al.(2017) DLX4_FL_Methyl-HT-SELEX_1	0.852	0.877
DLX4 M05007_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX4_FL_Methyl-HT-SELEX_2	0.852	0.877
Dlx4 M00409_2.00	Mus musculus	NWAATNDN	NHNATTWN	PBM Berger et al.(2008) Dlx4_3488	0.852	0.860
Dlx3 M00387_2.00	Mus musculus	NTAATDRNN	NNYHATTAN	PBM Berger et al.(2008) Dlx3_1030	0.845	0.860
DLX3 M03081_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX3_1	0.845	0.860
DLX3 M04922_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX3_eDBD_HT-SELEX	0.845	0.860
DLX3 M04925_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX3_FL_HT-SELEX	0.845	0.860
DLX3 M09129_2.00	Homo sapiens	RVTAATTRVH	DBYAATTABY	Misc Kulakovskiy et al.(2013) DLX3_HUMAN.H11MO.0.C	0.845	0.860
Dlx3 M09172_2.00	Mus musculus	RVTAATTRVH	DBYAATTABY	Misc Kulakovskiy et al.(2013) DLX3_MOUSE.H11MO.0.C	0.845	0.860
dlx3.L M10803_2.00	Xenopus laevis	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX3_02	0.845	0.860
DLX3 M10638_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX3_Q3	0.845	0.860
DLX3 M10639_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX3_Q6	0.845	0.860
dlx3.L M10804_2.00	Xenopus laevis	YAWRTAAAYAWWRY	RYWWTRTTTAYWWR	Transfac Matys et al.(2006) V$XFD1_01	0.845	0.860
DLX3 M04923_2.00	Homo sapiens	NTWAYKHB	VDMRTWAN	SELEX Yin et al.(2017) DLX3_eDBD_Methyl-HT-SELEX_1	0.845	0.860
DLX3 M04924_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX3_eDBD_Methyl-HT-SELEX_2	0.845	0.860
DLX3 M04926_2.00	Homo sapiens	NTWAYGHB	VDCRTWAN	SELEX Yin et al.(2017) DLX3_FL_Methyl-HT-SELEX_1	0.845	0.860
DLX3 M04927_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX3_FL_Methyl-HT-SELEX_2	0.845	0.860
Dlx2 M00423_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Dlx2_2273	0.833	0.877
DLX2 M03118_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX2_1	0.833	0.877
Dlx2 M03254_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Dlx2_1	0.833	0.877
DLX2 M05026_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_eDBD_HT-SELEX	0.833	0.877
DLX2 M05028_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_FL_HT-SELEX	0.833	0.877
DLX2 M10674_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX2_Q6	0.833	0.877
DLX2 M05027_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_eDBD_Methyl-HT-SELEX	0.833	0.877
DLX2 M05029_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_FL_Methyl-HT-SELEX	0.833	0.877
Dlx1 M00491_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Dlx1_1741	0.824	0.877
DLX1 M03166_2.00	Homo sapiens	NNTAATTDNN	NNHAATTANN	SELEX Jolma et al.(2013) DLX1_1	0.824	0.877
Dlx1 M03281_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Dlx1_1	0.824	0.877
DLX1 M05176_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX1_eDBD_HT-SELEX	0.824	0.877
DLX1 M05178_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX1_FL_HT-SELEX	0.824	0.877
DLX1 M05177_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX1_eDBD_Methyl-HT-SELEX	0.824	0.877
DLX1 M05179_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX1_FL_Methyl-HT-SELEX	0.824	0.877
DLX6 M03078_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX6_1	0.824	0.860
DLX6 M04905_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX6_eDBD_HT-SELEX	0.824	0.860
DLX6 M04906_2.00	Homo sapiens	NTAAYKAB	VTMRTTAN	SELEX Yin et al.(2017) DLX6_eDBD_Methyl-HT-SELEX_1	0.824	0.860
DLX6 M04907_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX6_eDBD_Methyl-HT-SELEX_2	0.824	0.860
Dlx5 M00449_2.00	Mus musculus	WRATNDN	NHNATYW	PBM Berger et al.(2008) Dlx5_3419	0.823	0.860
DLX5 M03095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX5_1	0.823	0.860
DLX5 M04953_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_eDBD_HT-SELEX	0.823	0.860
DLX5 M04956_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_FL_HT-SELEX	0.823	0.860
Dlx5 M09195_2.00	Mus musculus	WAATTRYWKBB	VVMWRYAATTW	Misc Kulakovskiy et al.(2013) DLX5_MOUSE.H11MO.0.C	0.823	0.860
DLX5 M10650_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX5_Q3	0.823	0.860
DLX5 M04954_2.00	Homo sapiens	NTAAYDAB	VTHRTTAN	SELEX Yin et al.(2017) DLX5_eDBD_Methyl-HT-SELEX_1	0.823	0.860
DLX5 M04955_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_eDBD_Methyl-HT-SELEX_2	0.823	0.860
DLX5 M04957_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) DLX5_FL_Methyl-HT-SELEX_1	0.823	0.860
DLX5 M04958_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_FL_Methyl-HT-SELEX_2	0.823	0.860
ceh-23 M00671_2.00	Caenorhabditis elegans	HTAATTRNNN	NNNYAATTAD	PBM Narasimhan et al.(2015) pTH9478	0.686	0.526
NEMVEDRAFT_v1g8907 M02154_2.00	Nematostella vectensis	NTAATDRNNN	NNNYHATTAN	PBM Weirauch et al.(2014) pTH6483	0.683	0.561
MSX2 M00290_2.00	Homo sapiens	WDATNDNN	NNHNATHW	PBM Barrera et al.(2016) MSX2_REF	0.679	0.596
Msx2 M00414_2.00	Mus musculus	HRATKRNN	NNYMATYD	PBM Berger et al.(2008) Msx2_3449	0.679	0.596
Msx3 M00429_2.00	Mus musculus	TAATKDNN	NNHMATTA	PBM Berger et al.(2008) Msx3_3206	0.679	0.596
Msx1 M00501_2.00	Mus musculus	NHDATND	HNATHDN	PBM Berger et al.(2008) Msx1_3031	0.679	0.596
MSX1 M03184_2.00	Homo sapiens	TAATTRBHHNHTAATTRN	NYAATTADNDDVYAATTA	SELEX Jolma et al.(2013) MSX1_1	0.679	0.596
MSX1 M03185_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_2	0.679	0.596
MSX1 M03186_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_3	0.679	0.596
MSX2 M03127_2.00	Homo sapiens	TAATTRBHWKWTAATTGV	BCAATTAWMWDVYAATTA	SELEX Jolma et al.(2013) MSX2_1	0.679	0.596
MSX2 M03128_2.00	Homo sapiens	NTAATTGB	VCAATTAN	SELEX Jolma et al.(2013) MSX2_2	0.679	0.596
Msx3 M03255_2.00	Mus musculus	TAATTGSHHNNTAATTRN	NYAATTANNDDSCAATTA	SELEX Jolma et al.(2013) Msx3_1	0.679	0.596
Msx3 M03256_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Msx3_2	0.679	0.596
MSX1 M05221_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_HT-SELEX	0.679	0.596
MSX1 M05224_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_HT-SELEX	0.679	0.596
MSX2 M05060_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_HT-SELEX	0.679	0.596
MSX1 M10715_2.00	Homo sapiens	HNBTWWNTG	CANWWAVND	Transfac Matys et al.(2006) V$MSX1_01	0.679	0.596
MSX1 M10716_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5_01	0.679	0.596
MSX1 M10717_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5	0.679	0.596
MSX2 M10677_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q3	0.679	0.596
MSX2 M10678_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q6	0.679	0.596
MSX2 M00288_2.00	Homo sapiens	NTAATNDN	NHNATTAN	PBM Barrera et al.(2016) MSX2_P148H	0.679	0.596
MSX1 M05222_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_1	0.679	0.596
MSX1 M05223_2.00	Homo sapiens	NTWAYGMB	VKCRTWAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_2	0.679	0.596
MSX1 M05225_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_1	0.679	0.596
MSX1 M05226_2.00	Homo sapiens	NTWAYGWB	VWCRTWAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_2	0.679	0.596
MSX2 M05061_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_1	0.679	0.596
MSX2 M05062_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_2	0.679	0.596
Dr M00555_2.00	Drosophila melanogaster	TAATTRNN	NNYAATTA	PBM Busser et al.(2012a) Msh	0.679	0.579
Dr M06482_2.00	Drosophila melanogaster	TAATTGS	SCAATTA	B1H Mathelier et al.(2014) MA0188.1	0.679	0.579
Dr M06229_2.00	Drosophila melanogaster	TAATTGSHB	VDSCAATTA	B1H Zhu et al.(2011) Dr_Cell_FBgn0000492	0.679	0.579
Dr M06230_2.00	Drosophila melanogaster	TAATTR	YAATTA	B1H Zhu et al.(2011) Dr_SOLEXA_FBgn0000492	0.679	0.579
bsh M02113_2.00	Drosophila melanogaster	NNTAAYBDNN	NNHVRTTANN	PBM Weirauch et al.(2014) pTH6569	0.678	0.579
bsh M03786_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) bsh_1	0.678	0.579
bsh M03787_2.00	Drosophila melanogaster	TAATTRVWTAATKR	YMATTAWBYAATTA	SELEX Nitta et al.(2015) bsh_2	0.678	0.579
bsh M03788_2.00	Drosophila melanogaster	NTAATBRN	NYVATTAN	SELEX Nitta et al.(2015) bsh_3	0.678	0.579
bsh M06483_2.00	Drosophila melanogaster	YTAATBR	YVATTAR	B1H Mathelier et al.(2014) MA0214.1	0.678	0.579
bsh M06231_2.00	Drosophila melanogaster	HYTAATBRV	BYVATTARD	B1H Zhu et al.(2011) Bsh_Cell_FBgn0000529	0.678	0.579
bsh M06232_2.00	Drosophila melanogaster	NTAATKR	YMATTAN	B1H Zhu et al.(2011) Bsh_SOLEXA_FBgn0000529	0.678	0.579
Bsx M00516_2.00	Mus musculus	NTAAYBDNN	NNHVRTTAN	PBM Berger et al.(2008) Bsx_3483	0.676	0.561
BSX M03235_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BSX_1	0.676	0.561
BSX M05377_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_1	0.676	0.561
BSX M05378_2.00	Homo sapiens	BTAATBRV	BYVATTAV	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_2	0.676	0.561
BSX M05379_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_1	0.676	0.561
BSX M05380_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_2	0.676	0.561
MSX2 M00289_2.00	Homo sapiens	WDATWDNN	NNHWATHW	PBM Barrera et al.(2016) MSX2_R172H	0.671	0.579
Barx2 M00457_2.00	Mus musculus	NTAABNDNN	NNHNVTTAN	PBM Berger et al.(2008) Barx2_3447	0.665	0.561
BARX2 M04915_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_HT-SELEX	0.665	0.561
BARX2 M04916_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_Methyl-HT-SELEX	0.665	0.561
Lhx1 M00405_2.00	Mus musculus	TRATDRNNN	NNNYHATYA	PBM Berger et al.(2008) Lhx1_2240	0.662	0.386
Lhx5 M00445_2.00	Mus musculus	TAATKRNNN	NNNYMATTA	PBM Berger et al.(2008) Lhx5_2279	0.662	0.386
LHX1 M05410_2.00	Homo sapiens	NTRATBRN	NYVATYAN	SELEX Yin et al.(2017) LHX1_eDBD_HT-SELEX	0.662	0.386
LHX5 M04936_2.00	Homo sapiens	NTAATTRS	SYAATTAN	SELEX Yin et al.(2017) LHX5_FL_HT-SELEX	0.662	0.386
LHX1 M05411_2.00	Homo sapiens	NHRAYGHN	NDCRTYDN	SELEX Yin et al.(2017) LHX1_eDBD_Methyl-HT-SELEX	0.662	0.386
LHX5 M04937_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) LHX5_FL_Methyl-HT-SELEX_1	0.662	0.386
LHX5 M04938_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) LHX5_FL_Methyl-HT-SELEX_2	0.662	0.386
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.661	0.561
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.661	0.561
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.661	0.561
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.661	0.561
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.661	0.561
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.661	0.561
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.661	0.561
KLLA0_D10043g M02140_2.00	Kluyveromyces lactis	NNNNWWNNNN	NNNNWWNNNN	PBM Weirauch et al.(2014) pTH6070	0.661	0.404
Lim1 M03853_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Lim1_1	0.652	0.368
Lim1 M06529_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0194.1	0.652	0.368
Lim1 M06332_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Zhu et al.(2011) Lim1_Cell_FBgn0026411	0.652	0.368
Lim1 M06333_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Lim1_SOLEXA_FBgn0026411	0.652	0.368
Barx1 M00413_2.00	Mus musculus	NNTAAYBDNN	NNHVRTTANN	PBM Berger et al.(2008) Barx1_2877	0.651	0.526
barx1 M02107_2.00	Tetraodon nigroviridis	NTAAYNNNN	NNNNRTTAN	PBM Weirauch et al.(2014) pTH6449	0.651	0.526
BARX1 M03144_2.00	Homo sapiens	TAATBGNWWWTTAATBR	YVATTAAWWWNCVATTA	SELEX Jolma et al.(2013) BARX1_1	0.651	0.526
BARX1 M03145_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BARX1_2	0.651	0.526
Barx1 M09181_2.00	Mus musculus	NNWAAKKGYTWH	DWARCMMTTWNN	Misc Kulakovskiy et al.(2013) BARX1_MOUSE.H11MO.0.C	0.651	0.526
btn M03832_2.00	Drosophila melanogaster	NNTAATKANB	VNTMATTANN	SELEX Nitta et al.(2015) btn_1	0.649	0.491
btn M03833_2.00	Drosophila melanogaster	VNTAATKABN	NVTMATTANB	SELEX Nitta et al.(2015) btn_2	0.649	0.491
btn M06515_2.00	Drosophila melanogaster	DTAATKA	TMATTAH	B1H Mathelier et al.(2014) MA0215.1	0.649	0.491
btn M06307_2.00	Drosophila melanogaster	NDTAATKA	TMATTAHN	B1H Zhu et al.(2011) Btn_Cell_FBgn0014949	0.649	0.491
btn M06308_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) Btn_SOLEXA_FBgn0014949	0.649	0.491
Meox1 M00384_2.00	Mus musculus	NTRATKRNN	NNYMATYAN	PBM Berger et al.(2008) Meox1_2310	0.649	0.474
MEOX1 M03077_2.00	Homo sapiens	NNTAATTASN	NSTAATTANN	SELEX Jolma et al.(2013) MEOX1_1	0.649	0.474
MEOX1 M04901_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_1	0.649	0.474
MEOX1 M04902_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_2	0.649	0.474
MEOX1 M04903_2.00	Homo sapiens	NTAAYGWB	VWCRTTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_1	0.649	0.474
MEOX1 M04904_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_2	0.649	0.474
ceh-51 M00678_2.00	Caenorhabditis elegans	NNDAKDRNN	NNYHMTHNN	PBM Narasimhan et al.(2015) pTH9353	0.649	0.439
unpg M03836_2.00	Drosophila melanogaster	SSTAATYRVN	NBYRATTASS	SELEX Nitta et al.(2015) unpg_1	0.648	0.526
unpg M06517_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0251.1	0.648	0.526
unpg M06311_2.00	Drosophila melanogaster	NBTAATTR	YAATTAVN	B1H Zhu et al.(2011) Unpg_Cell_FBgn0015561	0.648	0.526
unpg M06312_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Unpg_SOLEXA_FBgn0015561	0.648	0.526
Gbx2 M00462_2.00	Mus musculus	NNDAHNN	NNDTHNN	PBM Berger et al.(2008) Gbx2_3110	0.648	0.509
Gbx1 M00525_2.00	Mus musculus	NNTAATNR	YNATTANN	PBM Berger et al.(2008) Gbx1_2883	0.648	0.509
GBX1 M03193_2.00	Homo sapiens	NBTAATTRSB	VSYAATTAVN	SELEX Jolma et al.(2013) GBX1_1	0.648	0.509
GBX2 M03201_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_1	0.648	0.509
GBX2 M03202_2.00	Homo sapiens	TAATTRVBCAATWA	TWATTGVBYAATTA	SELEX Jolma et al.(2013) GBX2_2	0.648	0.509
GBX2 M03203_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_3	0.648	0.509
Gbx1 M03286_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx1_1	0.648	0.509
Gbx2 M03268_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx2_1	0.648	0.509
GBX2 M05265_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_HT-SELEX	0.648	0.509
GBX2 M05268_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) GBX2_FL_HT-SELEX	0.648	0.509
GBX2 M05266_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_1	0.648	0.509
GBX2 M05267_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_2	0.648	0.509
GBX2 M05269_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_1	0.648	0.509
GBX2 M05270_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_2	0.648	0.509
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.647	0.561
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.647	0.561
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.647	0.561
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.647	0.561
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.647	0.561
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	0.647	0.544
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	0.647	0.544
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	0.647	0.544
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	0.647	0.544
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.645	0.526
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.645	0.526
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.645	0.526
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.645	0.509
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.645	0.509
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.645	0.509
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.645	0.544
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.645	0.544
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.645	0.544
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.645	0.544
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.645	0.544
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.645	0.544
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.645	0.544
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.645	0.544
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.645	0.526
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.645	0.526
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.645	0.544
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.644	0.579
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.644	0.579
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.644	0.579
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.644	0.579
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.644	0.579
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.644	0.579
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.644	0.579
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.644	0.544
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.644	0.544
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.644	0.544
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.644	0.544
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.644	0.544
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.644	0.544
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.644	0.544
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.644	0.544
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_2	0.644	0.544
BARHL2 M05167_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_1	0.644	0.544
BARHL2 M05168_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_2	0.644	0.544
BARHL2 M05166_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_Methyl-HT-SELEX	0.644	0.544
BARHL2 M05169_2.00	Homo sapiens	NTAAWTGN	NCAWTTAN	SELEX Yin et al.(2017) BARHL2_FL_Methyl-HT-SELEX	0.644	0.544
CG18599 M06539_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0177.1	0.634	0.526
CG18599 M06354_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) CG18599_Cell_FBgn0038592	0.634	0.526
CG18599 M06355_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) CG18599_SOLEXA_FBgn0038592	0.634	0.526
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.634	0.561
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.634	0.561
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.634	0.561
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.634	0.561
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.634	0.561
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.634	0.561
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.634	0.561
eve M00556_2.00	Drosophila melanogaster	NNTAATTARN	NYTAATTANN	PBM Busser et al.(2012a) Eve	0.633	0.474
eve M02115_2.00	Drosophila melanogaster	NTAATNDNN	NNHNATTAN	PBM Weirauch et al.(2014) pTH6436	0.633	0.474
eve M03794_2.00	Drosophila melanogaster	VYTAATKASN	NSTMATTARB	SELEX Nitta et al.(2015) eve_1	0.633	0.474
eve M06486_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0221.1	0.633	0.474
eve M06240_2.00	Drosophila melanogaster	DYTAATKA	TMATTARH	B1H Zhu et al.(2011) Eve_Cell_FBgn0000606	0.633	0.474
eve M06241_2.00	Drosophila melanogaster	HKBTAAYNDTKY	RMAHNRTTAVMD	B1H Zhu et al.(2011) eve_FlyReg_FBgn0000606	0.633	0.474
eve M06242_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Eve_SOLEXA_FBgn0000606	0.633	0.474
eve M09678_2.00	Drosophila melanogaster	NKHTAATKD	HMATTADMN	Misc Kulakovskiy et al.(2009) eve	0.633	0.474
eve M10786_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EVE_Q6	0.633	0.474
en M03793_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) en_1	0.632	0.474
en M06485_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0220.1	0.632	0.474
en M06236_2.00	Drosophila melanogaster	NYTAATTR	YAATTARN	B1H Zhu et al.(2011) En_Cell_FBgn0000577	0.632	0.474
en M06237_2.00	Drosophila melanogaster	DBTAATKR	YMATTAVH	B1H Zhu et al.(2011) en_FlyReg_FBgn0000577	0.632	0.474
en M06238_2.00	Drosophila melanogaster	NNNTAATTRN	NYAATTANNN	B1H Zhu et al.(2011) en_SOLEXA_2_FBgn0000577	0.632	0.474
en M06239_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Zhu et al.(2011) En_SOLEXA_FBgn0000577	0.632	0.474
en M09677_2.00	Drosophila melanogaster	HTAATTRN	NYAATTAD	Misc Kulakovskiy et al.(2009) en	0.632	0.474
en M10785_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EN_Q6	0.632	0.474
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.631	0.509
En2 M00484_2.00	Mus musculus	NNYHATHN	NDATDRNN	PBM Berger et al.(2008) En2_0952	0.630	0.491
EN2 M03189_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) EN2_1	0.630	0.491
EN2 M03190_2.00	Homo sapiens	VBTAATTRNN	NNYAATTAVB	SELEX Jolma et al.(2013) EN2_2	0.630	0.491
En2 M03276_2.00	Mus musculus	VBTAATTASN	NSTAATTAVB	SELEX Jolma et al.(2013) En2_1	0.630	0.491
EN2 M05237_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_HT-SELEX	0.630	0.491
EN2 M05238_2.00	Homo sapiens	VHTDAYGHB	VDCRTHADB	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_1	0.630	0.491
EN2 M05239_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_2	0.630	0.491
En1 M00519_2.00	Mus musculus	HNWTNNN	NNNAWND	PBM Berger et al.(2008) En1_3123	0.630	0.474
EN1 M03180_2.00	Homo sapiens	NNTAATTRVB	VBYAATTANN	SELEX Jolma et al.(2013) EN1_1	0.630	0.474
EN1 M03181_2.00	Homo sapiens	TAATTRSNYAATTA	TAATTRNSYAATTA	SELEX Jolma et al.(2013) EN1_2	0.630	0.474
EN1 M03182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) EN1_3	0.630	0.474
EN1 M03183_2.00	Homo sapiens	TDAKKRSNYMATTA	TAATKRNSYMMTHA	SELEX Jolma et al.(2013) EN1_4	0.630	0.474
EN1 M05218_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_HT-SELEX	0.630	0.474
EN1 M05871_2.00	Homo sapiens	VNYAATTA	TAATTRNB	SMiLE-seq Isakova et al.(2017) EN1	0.630	0.474
EN1 M10714_2.00	Homo sapiens	RTDDTBB	VVAHHAY	Transfac Matys et al.(2006) V$EN1_01	0.630	0.474
EN1 M05219_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_1	0.630	0.474
EN1 M05220_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_2	0.630	0.474
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.630	0.509
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.630	0.491
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.630	0.491
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.630	0.491
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.630	0.491
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.630	0.491
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.630	0.491
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.630	0.491
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.630	0.491
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.630	0.491
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.630	0.491
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.630	0.491
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.630	0.491
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.630	0.491
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.630	0.491
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.630	0.491
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.630	0.491
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.630	0.491
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.630	0.491
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.630	0.491
Gsx2 M00469_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Gsh2_3990	0.629	0.509
GSX1 M03205_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX1_1	0.629	0.509
GSX2 M03227_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX2_1	0.629	0.509
GSX1 M05271_2.00	Homo sapiens	NYMATNRN	NYNATKRN	SELEX Yin et al.(2017) GSX1_eDBD_HT-SELEX	0.629	0.509
GSX2 M05329_2.00	Homo sapiens	HTAATKRS	SYMATTAD	SELEX Yin et al.(2017) GSX2_eDBD_HT-SELEX	0.629	0.509
ind M06527_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0228.1	0.629	0.509
ind M06329_2.00	Drosophila melanogaster	YVYTAATKA	TMATTARBR	B1H Zhu et al.(2011) Ind_Cell_FBgn0025776	0.629	0.509
GSX1 M05272_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GSX1_eDBD_Methyl-HT-SELEX	0.629	0.509
GSX2 M05330_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GSX2_eDBD_Methyl-HT-SELEX	0.629	0.509
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.629	0.491
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.629	0.491
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.629	0.491
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.629	0.491
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.629	0.491
NEMVEDRAFT_v1g81309 M02152_2.00	Nematostella vectensis	NTAATDNNN	NNNHATTAN	PBM Weirauch et al.(2014) pTH5477	0.628	0.491
inv M06491_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Mathelier et al.(2014) MA0229.1	0.628	0.439
inv M06255_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Zhu et al.(2011) Inv_Cell_FBgn0001269	0.628	0.439
inv M06256_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_2_FBgn0001269	0.628	0.439
inv M06257_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_5_FBgn0001269	0.628	0.439
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.628	0.544
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.628	0.509
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.628	0.509
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.628	0.509
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.628	0.509
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.628	0.509
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.628	0.509
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.628	0.509
Hoxa1 M00450_2.00	Mus musculus	NHRATKRNN	NNYMATYDN	PBM Berger et al.(2008) Hoxa1_3425	0.625	0.509
HOXA1 M03096_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) HOXA1_1	0.625	0.509
HOXA1 M04959_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_HT-SELEX	0.625	0.509
HOXB1 M05057_2.00	Homo sapiens	NTAATTAS	STAATTAN	SELEX Yin et al.(2017) HOXB1_eDBD_HT-SELEX	0.625	0.509
HOXA1 M09133_2.00	Homo sapiens	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_HUMAN.H11MO.0.C	0.625	0.509
Hoxa1 M09196_2.00	Mus musculus	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_MOUSE.H11MO.0.C	0.625	0.509
HOXA1 M04960_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_1	0.625	0.509
HOXA1 M04961_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_2	0.625	0.509
HOXB1 M05058_2.00	Homo sapiens	GTAATBAN	NTVATTAC	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_1	0.625	0.509
HOXB1 M05059_2.00	Homo sapiens	NTRAYGMB	VKCRTYAN	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_2	0.625	0.509
O76842_CUPSA M02199_2.00	Cupiennius salei	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6251	0.625	0.491
lab M03797_2.00	Drosophila melanogaster	NTAATTAS	STAATTAN	SELEX Nitta et al.(2015) lab_1	0.625	0.491
lab M06493_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0230.1	0.625	0.491
lab M06260_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Zhu et al.(2011) Lab_Cell_FBgn0002522	0.625	0.491
lab M06261_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Lab_SOLEXA_FBgn0002522	0.625	0.491
Hoxd1 M00492_2.00	Mus musculus	NRATNDNN	NNHNATYN	PBM Berger et al.(2008) Hoxd1_3448	0.625	0.474
HOXD1 M05098_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_HT-SELEX	0.625	0.474
Hoxd1 M10768_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD1_03	0.625	0.474
HOXD1 M05099_2.00	Homo sapiens	BTAATKAV	BTMATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_1	0.625	0.474
HOXD1 M05100_2.00	Homo sapiens	NTWAYGAB	VTCRTWAN	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_2	0.625	0.474
Smp_158000 M02170_2.00	Schistosoma mansoni	TTAATTRG	CYAATTAA	PBM Weirauch et al.(2014) pTH5672	0.622	0.491
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.622	0.509
NANOG M05015_2.00	Homo sapiens	NYRABBVB	VBVVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_HT-SELEX	0.622	0.509
NANOG M09139_2.00	Homo sapiens	NTYWRCATNWSAAWRVN	NBYWTTSWNATGYWRAN	Misc Kulakovskiy et al.(2013) NANOG_HUMAN.H11MO.0.A	0.622	0.509
NANOG M10664_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_01	0.622	0.509
NANOG M10665_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_02	0.622	0.509
NANOG M10666_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_05	0.622	0.509
NANOG M10667_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_07	0.622	0.509
NANOG M10668_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q3	0.622	0.509
NANOG M10669_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q6	0.622	0.509
NANOG M05016_2.00	Homo sapiens	NHAAYGH	DCRTTDN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_1	0.622	0.509
NANOG M05017_2.00	Homo sapiens	NYRABKRN	NYMVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_2	0.622	0.509
VSX2 M00287_2.00	Homo sapiens	NYTAATTARN	NYTAATTARN	PBM Barrera et al.(2016) VSX2_REF	0.621	0.404
VSX2 M03124_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX2_1	0.621	0.404
VSX2 M05036_2.00	Homo sapiens	CTAATTAN	NTAATTAG	SELEX Yin et al.(2017) VSX2_eDBD_HT-SELEX	0.621	0.404
VSX2 M05039_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_HT-SELEX	0.621	0.404
Vsx2 M09180_2.00	Mus musculus	NNRGCTAATTAR	YTAATTAGCYNN	Misc Kulakovskiy et al.(2013) VSX2_MOUSE.H11MO.0.C	0.621	0.404
VSX2 M10676_2.00	Homo sapiens	HNNGCTAATTANBN	NVNTAATTAGCNND	Transfac Matys et al.(2006) V$CHX10_01	0.621	0.404
VSX2 M05037_2.00	Homo sapiens	VYAATTRR	YYAATTRB	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_1	0.621	0.404
VSX2 M05038_2.00	Homo sapiens	NTAAYKHN	NDMRTTAN	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_2	0.621	0.404
VSX2 M05040_2.00	Homo sapiens	NTAAYKVN	NBMRTTAN	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_1	0.621	0.404
VSX2 M05041_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_2	0.621	0.404
VSX2 M00285_2.00	Homo sapiens	NDTWTATTHNNN	NNNDAATAWAHN	PBM Barrera et al.(2016) VSX2_R200P	0.621	0.386
VSX2 M00286_2.00	Homo sapiens	YRWKWNN	NNWMWYR	PBM Barrera et al.(2016) VSX2_R200Q	0.621	0.386
CG32532 M03874_2.00	Drosophila melanogaster	NTAAYBNVRTTAN	NTAAYBNVRTTAN	SELEX Nitta et al.(2015) CG32532_1	0.620	0.404
CG32532 M06547_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0179.1	0.620	0.404
CG32532 M06370_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG32532_Cell_FBgn0052532	0.620	0.404
CG32532 M06371_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG32532_SOLEXA_FBgn0052532	0.620	0.404
Vsx2 M02130_2.00	Drosophila melanogaster	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6195	0.619	0.386
Vsx2 M03880_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Vsx2_1	0.619	0.386
Vsx2 M03881_2.00	Drosophila melanogaster	HRAYNVNNTRATKD	HMATYANNBNRTYD	SELEX Nitta et al.(2015) Vsx2_2	0.619	0.386
Vsx2 M06553_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Mathelier et al.(2014) MA0180.1	0.619	0.386
Vsx2 M06382_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Zhu et al.(2011) CG33980_Cell_FBgn0053980	0.619	0.386
Vsx2 M06383_2.00	Drosophila melanogaster	NNTAATTRRN	NYYAATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_0_FBgn0053980	0.619	0.386
Vsx2 M06384_2.00	Drosophila melanogaster	NNTAATKDN	NHMATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_10_FBgn0053980	0.619	0.386
Vsx2 M06385_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) CG33980_SOLEXA_FBgn0053980	0.619	0.386
HOXA2 M02083_2.00	Homo sapiens	NNNDHHNNN	NNNDDHNNN	PBM Weirauch et al.(2014) pTH5887	0.617	0.526
Hoxa2 M00403_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa2_3079	0.617	0.526
HOXA2 M03097_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXA2_1	0.617	0.526
HOXB2 M03213_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) HOXB2_1	0.617	0.526
Hoxa2 M03251_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxa2_1	0.617	0.526
pb M03872_2.00	Drosophila melanogaster	NTRAYKRY	RYMRTYAN	SELEX Nitta et al.(2015) pb_1	0.617	0.526
HOXA2 M04962_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_HT-SELEX	0.617	0.526
HOXA2 M04965_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_HT-SELEX	0.617	0.526
HOXB2 M05292_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB2_eDBD_HT-SELEX	0.617	0.526
pb M06545_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0238.1	0.617	0.526
pb M06366_2.00	Drosophila melanogaster	BYTAATKA	TMATTARV	B1H Zhu et al.(2011) Pb_Cell_FBgn0051481	0.617	0.526
pb M06367_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Pb_SOLEXA_FBgn0051481	0.617	0.526
Hoxa2 M09566_2.00	Mus musculus	DTGATKGATKDB	VHMATCMATCAH	Misc Heinz et al.(2010) mES-Hoxa2_Donaldson_et_al.	0.617	0.526
HOXA2 M04963_2.00	Homo sapiens	NTAATTAN	NTAATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_1	0.617	0.526
HOXA2 M04964_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_2	0.617	0.526
HOXA2 M04966_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_1	0.617	0.526
HOXA2 M04967_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_2	0.617	0.526
HOXB2 M05293_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_1	0.617	0.526
HOXB2 M05294_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_2	0.617	0.526
repo M03826_2.00	Drosophila melanogaster	VTTAATTARB	VYTAATTAAB	SELEX Nitta et al.(2015) repo_1	0.615	0.456
repo M03827_2.00	Drosophila melanogaster	VKYAATTRRN	NYYAATTRMB	SELEX Nitta et al.(2015) repo_2	0.615	0.456
repo M03828_2.00	Drosophila melanogaster	VBYAATTRVNNBYAATTRVB	VBYAATTRVNNBYAATTRVB	SELEX Nitta et al.(2015) repo_3	0.615	0.456
repo M06511_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0240.1	0.615	0.456
repo M06301_2.00	Drosophila melanogaster	DTTAATTA	TAATTAAH	B1H Zhu et al.(2011) Repo_Cell_FBgn0011701	0.615	0.456
repo M06302_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Repo_SOLEXA_FBgn0011701	0.615	0.456
ARX M00261_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) ARX_P353L	0.615	0.526
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.615	0.421
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.615	0.421
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.615	0.421
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.615	0.421
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.615	0.421
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.615	0.421
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.615	0.421
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.615	0.421
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.615	0.421
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.615	0.421
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.615	0.421
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.615	0.421
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.615	0.421
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.615	0.421
hbn M03813_2.00	Drosophila melanogaster	HTAATYTAATTAD	HTAATTARATTAD	SELEX Nitta et al.(2015) hbn_1	0.615	0.491
hbn M06506_2.00	Drosophila melanogaster	TTAATTR	YAATTAA	B1H Mathelier et al.(2014) MA0226.1	0.615	0.491
hbn M06291_2.00	Drosophila melanogaster	TWAWTTR	YAAWTWA	B1H Zhu et al.(2011) Hbn_Cell_FBgn0008636	0.615	0.491
hbn M06292_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Hbn_SOLEXA_FBgn0008636	0.615	0.491
ARX M00264_2.00	Homo sapiens	NNWRATNNN	NNNATYWNN	PBM Barrera et al.(2016) ARX_REF	0.615	0.509
Arx M00467_2.00	Mus musculus	NTAATTDN	NHAATTAN	PBM Berger et al.(2008) Arx_1738	0.615	0.509
ARX M03076_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ARX_1	0.615	0.509
Arx M03269_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Arx_1	0.615	0.509
ARX M04895_2.00	Homo sapiens	BTAATTRR	YYAATTAV	SELEX Yin et al.(2017) ARX_eDBD_HT-SELEX	0.615	0.509
Arx M10775_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARX_05	0.615	0.509
ARX M00262_2.00	Homo sapiens	ATAATTAT	ATAATTAT	PBM Barrera et al.(2016) ARX_P353R	0.615	0.509
ARX M04896_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ARX_eDBD_Methyl-HT-SELEX	0.615	0.509
ARX M00260_2.00	Homo sapiens	NMTAATTANNN	NNNTAATTAKN	PBM Barrera et al.(2016) ARX_L343Q	0.615	0.491
OdsH M03851_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) OdsH_1	0.615	0.421
OdsH M03852_2.00	Drosophila melanogaster	TAATBNVATTA	TAATBNVATTA	SELEX Nitta et al.(2015) OdsH_2	0.615	0.421
OdsH M06528_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0198.1	0.615	0.421
OdsH M06330_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Zhu et al.(2011) Odsh_Cell_FBgn0026058	0.615	0.421
OdsH M06331_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Odsh_SOLEXA_FBgn0026058	0.615	0.421
al M03776_2.00	Drosophila melanogaster	TAAYBNVRTTA	TAAYBNVRTTA	SELEX Nitta et al.(2015) al_1	0.614	0.491
al M06477_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0208.1	0.614	0.491
al M06212_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) Al_Cell_FBgn0000061	0.614	0.491
al M06213_2.00	Drosophila melanogaster	NNYTAATTR	YAATTARNN	B1H Zhu et al.(2011) Al_SOLEXA_FBgn0000061	0.614	0.491
unc-4 M03846_2.00	Drosophila melanogaster	TAATTNAATTA	TAATTNAATTA	SELEX Nitta et al.(2015) unc-4_1	0.614	0.421
unc-4 M06523_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0250.1	0.614	0.421
Nanog M02098_2.00	Mus musculus	NHDAYNDNN	NNHNRTHDN	PBM Weirauch et al.(2014) pTH5685	0.613	0.456
Nanog M09176_2.00	Mus musculus	HTYWRMAWNWSAAWRVV	BBYWTTSWNWTKYWRAD	Misc Kulakovskiy et al.(2013) NANOG_MOUSE.H11MO.0.A	0.613	0.456
Nanog M09565_2.00	Mus musculus	BYTRATKGSY	RSCMATYARV	Misc Heinz et al.(2010) mES-Nanog_GSE11724	0.613	0.456
Isx M00452_2.00	Mus musculus	NNHDATNN	NNATHDNN	PBM Berger et al.(2008) Isx_3445	0.613	0.421
ISX M00319_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_REF	0.612	0.421
ISX M03218_2.00	Homo sapiens	NTAATTARATTAN	NTAATYTAATTAN	SELEX Jolma et al.(2013) ISX_1	0.612	0.421
ISX M03219_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Jolma et al.(2013) ISX_2	0.612	0.421
ISX M03220_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) ISX_3	0.612	0.421
ISX M05304_2.00	Homo sapiens	BTAATTRG	CYAATTAV	SELEX Yin et al.(2017) ISX_eDBD_HT-SELEX	0.612	0.421
ISX M05307_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_HT-SELEX	0.612	0.421
ISX M05305_2.00	Homo sapiens	NTAATTAG	CTAATTAN	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_1	0.612	0.421
ISX M05306_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_2	0.612	0.421
ISX M05308_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_1	0.612	0.421
ISX M05309_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_2	0.612	0.421
Pph13 M03845_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Pph13_1	0.611	0.491
Pph13 M06522_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Mathelier et al.(2014) MA0200.1	0.611	0.491
Pph13 M06321_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Pph13_Cell_FBgn0023489	0.611	0.491
Pph13 M06322_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Pph13_SOLEXA_FBgn0023489	0.611	0.491
SHOX M02095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5805	0.611	0.456
Shox2 M00439_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Shox2_2641	0.611	0.456
SHOX M03232_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) SHOX_1	0.611	0.456
SHOX2 M03204_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) SHOX2_1	0.611	0.456
Shox2 M03263_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Shox2_1	0.611	0.456
CG5369 M03876_2.00	Drosophila melanogaster	TAATTHVATTA	TAATBDAATTA	SELEX Nitta et al.(2015) CG5369_1	0.611	0.456
CG5369 M03877_2.00	Drosophila melanogaster	TAATTRNNTAATBN	NVATTANNYAATTA	SELEX Nitta et al.(2015) CG5369_2	0.611	0.456
CG5369 M03878_2.00	Drosophila melanogaster	TAATTVRATWA	TWATYBAATTA	SELEX Nitta et al.(2015) CG5369_3	0.611	0.456
SHOX M05366_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_HT-SELEX	0.611	0.456
Shox2 M10772_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SHOX2_05	0.611	0.456
SHOX M05367_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_1	0.611	0.456
SHOX M05368_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_2	0.611	0.456
Uncx M00443_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Uncx4	0.610	0.404
uncx M02111_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5474	0.610	0.404
UNCX M03191_2.00	Homo sapiens	NWAATTVVRTHWN	NWDAYBBAATTWN	SELEX Jolma et al.(2013) UNCX_1	0.610	0.404
UNCX M03192_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) UNCX_2	0.610	0.404
Uncx M03264_2.00	Mus musculus	NTAATTVRATTAN	NTAATYBAATTAN	SELEX Jolma et al.(2013) Uncx_1	0.610	0.404
Uncx M03265_2.00	Mus musculus	NTAATTRR	YYAATTAN	SELEX Jolma et al.(2013) Uncx_2	0.610	0.404
UNCX M05240_2.00	Homo sapiens	NYAATTRV	BYAATTRN	SELEX Yin et al.(2017) UNCX_eDBD_HT-SELEX	0.610	0.404
UNCX M05241_2.00	Homo sapiens	NYRRYKNN	NNMRYYRN	SELEX Yin et al.(2017) UNCX_eDBD_Methyl-HT-SELEX	0.610	0.404
PHDP M03849_2.00	Drosophila melanogaster	NTAATKNVATTAN	NTAATBNMATTAN	SELEX Nitta et al.(2015) PHDP_1	0.609	0.456
PHDP M06525_2.00	Drosophila melanogaster	HTAATTD	HAATTAD	B1H Mathelier et al.(2014) MA0457.1	0.609	0.456
PHDP M06325_2.00	Drosophila melanogaster	HTAATT	AATTAD	B1H Zhu et al.(2011) PhdP_Cell_FBgn0025334	0.609	0.456
PHDP M06326_2.00	Drosophila melanogaster	YTAATT	AATTAR	B1H Zhu et al.(2011) PhdP_SOLEXA_FBgn0025334	0.609	0.456
vsx2 M02079_2.00	Danio rerio	NNYTAATTARN	NYTAATTARNN	PBM Weirauch et al.(2014) pTH6221	0.609	0.386
Alx1 M00471_2.00	Mus musculus	NTAATTRN	NYAATTAN	PBM Berger et al.(2008) Cart1_0997	0.609	0.456
Alx1 M00472_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Cart1_1275	0.609	0.456
Alx4 M00487_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Alx4_1744	0.609	0.456
ALX4 M03079_2.00	Homo sapiens	NTAATYNRRTTAN	NTAAYYNRATTAN	SELEX Jolma et al.(2013) ALX4_1	0.609	0.456
ALX1 M03226_2.00	Homo sapiens	NTAATTRVRTTAN	NTAAYBYAATTAN	SELEX Jolma et al.(2013) CART1_1	0.609	0.456
Alx1 M03272_2.00	Mus musculus	NNTAATTRRD	HYYAATTANN	SELEX Jolma et al.(2013) Alx1_1	0.609	0.456
Alx1 M03273_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx1_2	0.609	0.456
Alx4 M03278_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx4_1	0.609	0.456
ALX1 M05327_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_HT-SELEX	0.609	0.456
ALX4 M04917_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_HT-SELEX	0.609	0.456
ALX1 M09160_2.00	Homo sapiens	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_HUMAN.H11MO.0.B	0.609	0.456
Alx1 M09201_2.00	Mus musculus	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_MOUSE.H11MO.0.B	0.609	0.456
ALX4 M10637_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ALX4_01	0.609	0.456
ALX1 M10741_2.00	Homo sapiens	VVHTAATKNNHATTABYN	NRVTAATDNNMATTADBB	Transfac Matys et al.(2006) V$CART1_01	0.609	0.456
ALX1 M05328_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_Methyl-HT-SELEX	0.609	0.456
ALX4 M04918_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_1	0.609	0.456
ALX4 M04919_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_2	0.609	0.456
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.608	0.491
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.608	0.474
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.608	0.474
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.608	0.474
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.608	0.474
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.608	0.474
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.608	0.474
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.608	0.474
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.608	0.474
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.608	0.474
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.608	0.474
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.608	0.474
PHOX2B M00279_2.00	Homo sapiens	NVTAATTRMNN	NNKYAATTABN	PBM Barrera et al.(2016) PHOX2B_R100L	0.608	0.474
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.608	0.474
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.608	0.474
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.608	0.474
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.608	0.474
Noto M02101_2.00	Mus musculus	NNHHATDDNN	NNHHATDDNN	PBM Weirauch et al.(2014) pTH6268	0.608	0.509
PROP1 M00316_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) PROP1_R99Q	0.607	0.404
Vsx1 M02129_2.00	Drosophila melanogaster	VTTAATTRR	YYAATTAAB	PBM Weirauch et al.(2014) pTH5821	0.607	0.386
Vsx1 M03879_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) Vsx1_1	0.607	0.386
Vsx1 M06552_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0181.1	0.607	0.386
Vsx1 M06380_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG4136_Cell_FBgn0029775	0.607	0.386
Vsx1 M06381_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG4136_SOLEXA_FBgn0029775	0.607	0.386
NEMVEDRAFT_v1g205636 M02150_2.00	Nematostella vectensis	NTAATTAN	NTAATTAN	PBM Weirauch et al.(2014) pTH5491	0.606	0.491
EMX1 M02088_2.00	Homo sapiens	NNTAATKANN	NNTMATTANN	PBM Weirauch et al.(2014) pTH5677	0.606	0.474
EMX1 M03151_2.00	Homo sapiens	NBTAATTRNN	NNYAATTAVN	SELEX Jolma et al.(2013) EMX1_1	0.606	0.474
EMX1 M03152_2.00	Homo sapiens	YMATTARYTAATKR	YMATTARYTAATKR	SELEX Jolma et al.(2013) EMX1_2	0.606	0.474
EMX1 M05145_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_HT-SELEX	0.606	0.474
EMX1 M05147_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) EMX1_FL_HT-SELEX	0.606	0.474
EMX1 M05146_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_Methyl-HT-SELEX	0.606	0.474
EMX1 M05148_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_FL_Methyl-HT-SELEX	0.606	0.474
Alx3 M00402_2.00	Mus musculus	WAATNDN	NHNATTW	PBM Berger et al.(2008) Alx3_3418	0.605	0.439
ALX3 M03172_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_1	0.605	0.439
ALX3 M03173_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_2	0.605	0.439
ALX3 M03174_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ALX3_3	0.605	0.439
ALX3 M05195_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_HT-SELEX	0.605	0.439
ALX3 M05198_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_HT-SELEX	0.605	0.439
ALX3 M05196_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_1	0.605	0.439
ALX3 M05197_2.00	Homo sapiens	NTAAYBHN	NDVRTTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_2	0.605	0.439
ALX3 M05199_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_1	0.605	0.439
ALX3 M05200_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_2	0.605	0.439
MEOX2 M03103_2.00	Homo sapiens	NNTRATKASN	NSTMATYANN	SELEX Jolma et al.(2013) MEOX2_1	0.604	0.474
MEOX2 M03104_2.00	Homo sapiens	NTAATTANVNTAATTAV	BTAATTANBNTAATTAN	SELEX Jolma et al.(2013) MEOX2_2	0.604	0.474
MEOX2 M03105_2.00	Homo sapiens	HTAATGATGATKAN	NTMATCATCATTAD	SELEX Jolma et al.(2013) MEOX2_3	0.604	0.474
Meox2 M03271_2.00	Mus musculus	NTAATKAN	NTMATTAN	SELEX Jolma et al.(2013) Meox2_1	0.604	0.474
MEOX2 M04988_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_1	0.604	0.474
MEOX2 M04989_2.00	Homo sapiens	NTVATBRV	BYVATBAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_2	0.604	0.474
Meox2 M10771_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MEOX2_05	0.604	0.474
MEOX2 M04990_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_1	0.604	0.474
MEOX2 M04991_2.00	Homo sapiens	NTVATKRN	NYMATBAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_2	0.604	0.474
DRGX M03199_2.00	Homo sapiens	NTAATTNRATTAN	NTAATYNAATTAN	SELEX Jolma et al.(2013) DRGX_1	0.604	0.439
DRGX M05253_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_HT-SELEX	0.604	0.439
Drgx M10774_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRXL1_01	0.604	0.439
DRGX M05254_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_Methyl-HT-SELEX	0.604	0.439
CG2808 M03875_2.00	Drosophila melanogaster	TAATYNSRTTA	TAAYSNRATTA	SELEX Nitta et al.(2015) CG2808_1	0.604	0.421
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.604	0.386
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.604	0.386
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.604	0.368
Sebox M02097_2.00	Mus musculus	NHTTAATTAN	NTAATTAADN	PBM Weirauch et al.(2014) pTH6379	0.604	0.368
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.604	0.368
VSX1 M00268_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) VSX1_R166Q	0.604	0.368
CG11085 M03857_2.00	Drosophila melanogaster	BTAAWYGN	NCRWTTAV	SELEX Nitta et al.(2015) CG11085_1	0.602	0.456
CG11085 M03858_2.00	Drosophila melanogaster	NTAAWCGN	NCGWTTAN	SELEX Nitta et al.(2015) CG11085_2	0.602	0.456
CG11085 M06532_2.00	Drosophila melanogaster	TTAATDG	CHATTAA	B1H Mathelier et al.(2014) MA0171.1	0.602	0.456
CG11085 M06339_2.00	Drosophila melanogaster	NTTAATDGV	BCHATTAAN	B1H Zhu et al.(2011) CG11085_Cell_FBgn0030408	0.602	0.456
CG11085 M06340_2.00	Drosophila melanogaster	NHTAAWBRNN	NNYVWTTADN	B1H Zhu et al.(2011) CG11085_SOLEXA_FBgn0030408	0.602	0.456
CG11294 M03855_2.00	Drosophila melanogaster	TAATTVVATTA	TAATBBAATTA	SELEX Nitta et al.(2015) CG11294_1	0.602	0.439
CG11294 M03856_2.00	Drosophila melanogaster	TAATTDVATTA	TAATBHAATTA	SELEX Nitta et al.(2015) CG11294_2	0.602	0.439
CG11294 M06531_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0172.1	0.602	0.439
CG11294 M06337_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) CG11294_Cell_FBgn0030058	0.602	0.439
CG11294 M06338_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG11294_SOLEXA_FBgn0030058	0.602	0.439
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
estExt_GenewiseH_1.C_530082	Homeodomain	142	198	RKPRTIYTSFQLQQLNRRFQRTQYLALPERAELAAQLGLTQTQVKIWFQNRRSKYKK

Links
Other Homeodomain family TFs
Other *Branchiostoma floridae* TFs

5786 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ATH1	Arabidopsis thaliana	AT4G32980	D
AMTR_s00002p00243900	Amborella trichopoda	AMTR_s00002p00243900	I
AMTR_s00009p00109990	Amborella trichopoda	AMTR_s00009p00109990	I
AMTR_s00030p00173920	Amborella trichopoda	AMTR_s00030p00173920	I
AMTR_s00165p00052010	Amborella trichopoda	AMTR_s00165p00052010	I
BLH4	Arabidopsis thaliana	AT2G23760	I
BLH1	Arabidopsis thaliana	AT2G35940	I
BLH6	Arabidopsis thaliana	AT4G34610	I
BLH2	Arabidopsis thaliana	AT4G36870	I
BEL1	Arabidopsis thaliana	AT5G41410	I
BGIOSGA000492	Oryza indica	BGIOSGA000492	I
BGIOSGA007823	Oryza indica	BGIOSGA007823	I
BGIOSGA010051	Oryza indica	BGIOSGA010051	I
BGIOSGA011390	Oryza indica	BGIOSGA011390	I
BGIOSGA011748	Oryza indica	BGIOSGA011748	I
BGIOSGA013510	Oryza indica	BGIOSGA013510	I
BGIOSGA021033	Oryza indica	BGIOSGA021033	I
BGIOSGA022158	Oryza indica	BGIOSGA022158	I
BGIOSGA034459	Oryza indica	BGIOSGA034459	I
BGIOSGA035766	Oryza indica	BGIOSGA035766	I
BGIOSGA036588	Oryza indica	BGIOSGA036588	I
BGIOSGA036589	Oryza indica	BGIOSGA036589	I
Bo1g005330	Brassica oleracea	Bo1g005330	I
Bo1g008560	Brassica oleracea	Bo1g008560	I
Bo3g029830	Brassica oleracea	Bo3g029830	I
Bo3g153820	Brassica oleracea	Bo3g153820	I
Bo4g036190	Brassica oleracea	Bo4g036190	I
Bo4g142080	Brassica oleracea	Bo4g142080	I
Bo4g151860	Brassica oleracea	Bo4g151860	I
Bo4g185820	Brassica oleracea	Bo4g185820	I
Bo5g006800	Brassica oleracea	Bo5g006800	I
Bo6g119610	Brassica oleracea	Bo6g119610	I
Bo7g115960	Brassica oleracea	Bo7g115960	I
Bo7g116960	Brassica oleracea	Bo7g116960	I
Bo8g100290	Brassica oleracea	Bo8g100290	I
Bra005310	Brassica rapa	Bra005310	I
Bra010577	Brassica rapa	Bra010577	I
Bra011403	Brassica rapa	Bra011403	I
Bra011713	Brassica rapa	Bra011713	I
Bra013075	Brassica rapa	Bra013075	I
Bra013076	Brassica rapa	Bra013076	I
Bra015844	Brassica rapa	Bra015844	I
Bra017277	Brassica rapa	Bra017277	I
Bra017666	Brassica rapa	Bra017666	I
Bra023045	Brassica rapa	Bra023045	I
Bra025497	Brassica rapa	Bra025497	I
Bra032147	Brassica rapa	Bra032147	I
Bra037031	Brassica rapa	Bra037031	I
Bra039212	Brassica rapa	Bra039212	I
BRADI1G09615	Brachypodium distachyon	BRADI1G09615	I
BRADI1G12510	Brachypodium distachyon	BRADI1G12510	I
BRADI1G12520	Brachypodium distachyon	BRADI1G12520	I
BRADI1G37800	Brachypodium distachyon	BRADI1G37800	I
BRADI1G51980	Brachypodium distachyon	BRADI1G51980	I
BRADI1G74060	Brachypodium distachyon	BRADI1G74060	I
BRADI1G76940	Brachypodium distachyon	BRADI1G76940	I
BRADI2G23530	Brachypodium distachyon	BRADI2G23530	I
BRADI2G54940	Brachypodium distachyon	BRADI2G54940	I
BRADI3G32040	Brachypodium distachyon	BRADI3G32040	I
BRADI4G00740	Brachypodium distachyon	BRADI4G00740	I
BRADI4G25020	Brachypodium distachyon	BRADI4G25020	I
F775_11482	Aegilops tauschii	F775_11482	I
F775_13316	Aegilops tauschii	F775_13316	I
F775_15470	Aegilops tauschii	F775_15470	I
F775_18344	Aegilops tauschii	F775_18344	I
F775_19160	Aegilops tauschii	F775_19160	I
F775_25404	Aegilops tauschii	F775_25404	I
F775_27987	Aegilops tauschii	F775_27987	I
BLH2	Arabidopsis lyrata	fgenesh1_pm.C_scaffold_7000308	I
BLH1	Arabidopsis lyrata	fgenesh2_kg.4__1624__AT2G35940.3	I
BEL1	Arabidopsis lyrata	fgenesh2_kg.7__3270__AT5G41410.1	I
ATH1	Arabidopsis lyrata	fgenesh2_kg.7__829__AT4G32980.1	I
GLYMA01G25710	Glycine max	GLYMA01G25710	I
GLYMA01G38650	Glycine max	GLYMA01G38650	I
GLYMA01G43040	Glycine max	GLYMA01G43040	I
GLYMA02G06730	Glycine max	GLYMA02G06730	I
GLYMA02G35450	Glycine max	GLYMA02G35450	I
GLYMA03G17397	Glycine max	GLYMA03G17397	I
GLYMA03G36070	Glycine max	GLYMA03G36070	I
GLYMA04G01151	Glycine max	GLYMA04G01151	I
GLYMA04G03150	Glycine max	GLYMA04G03150	I
GLYMA04G03160	Glycine max	GLYMA04G03160	I
GLYMA05G37550	Glycine max	GLYMA05G37550	I
GLYMA06G03210	Glycine max	GLYMA06G03210	I
GLYMA06G05430	Glycine max	GLYMA06G05430	I
GLYMA08G02020	Glycine max	GLYMA08G02020	I
GLYMA10G10040	Glycine max	GLYMA10G10040	I
GLYMA11G02450	Glycine max	GLYMA11G02450	I
GLYMA11G06640	Glycine max	GLYMA11G06640	I
GLYMA11G18270	Glycine max	GLYMA11G18270	I
GLYMA11G20240	Glycine max	GLYMA11G20240	I
GLYMA12G08270	Glycine max	GLYMA12G08270	I
GLYMA12G10030	Glycine max	GLYMA12G10030	I
GLYMA12G29991	Glycine max	GLYMA12G29991	I
GLYMA12G31480	Glycine max	GLYMA12G31480	I
GLYMA13G38910	Glycine max	GLYMA13G38910	I
GLYMA13G39901	Glycine max	GLYMA13G39901	I
GLYMA16G25770	Glycine max	GLYMA16G25770	I
GLYMA17G34811	Glycine max	GLYMA17G34811	I
GLYMA18G41280	Glycine max	GLYMA18G41280	I
GLYMA19G38690	Glycine max	GLYMA19G38690	I
GRMZM2G004641	Zea mays	GRMZM2G004641	I
GRMZM2G011588	Zea mays	GRMZM2G011588	I
GRMZM2G013617	Zea mays	GRMZM2G013617	I
GRMZM2G064466	Zea mays	GRMZM2G064466	I
GRMZM2G076272	Zea mays	GRMZM2G076272	I
GRMZM2G099319	Zea mays	GRMZM2G099319	I
GRMZM2G148098	Zea mays	GRMZM2G148098	I
GRMZM2G154641	Zea mays	GRMZM2G154641	I
GRMZM2G161435	Zea mays	GRMZM2G161435	I
GRMZM2G327059	Zea mays	GRMZM2G327059	I
GRMZM2G333565	Zea mays	GRMZM2G333565	I
GRMZM2G396114	Zea mays	GRMZM2G396114	I
GRMZM2G458728	Zea mays	GRMZM2G458728	I
GSMUA_Achr10G06670_001	Musa acuminata	GSMUA_Achr10G06670_001	I
GSMUA_Achr10G09410_001	Musa acuminata	GSMUA_Achr10G09410_001	I
GSMUA_Achr11G07620_001	Musa acuminata	GSMUA_Achr11G07620_001	I
GSMUA_Achr1G06400_001	Musa acuminata	GSMUA_Achr1G06400_001	I
GSMUA_Achr1G23300_001	Musa acuminata	GSMUA_Achr1G23300_001	I
GSMUA_Achr1G26900_001	Musa acuminata	GSMUA_Achr1G26900_001	I
GSMUA_Achr2G04310_001	Musa acuminata	GSMUA_Achr2G04310_001	I
GSMUA_Achr3G29230_001	Musa acuminata	GSMUA_Achr3G29230_001	I
GSMUA_Achr4G04480_001	Musa acuminata	GSMUA_Achr4G04480_001	I
GSMUA_Achr4G13590_001	Musa acuminata	GSMUA_Achr4G13590_001	I
GSMUA_Achr5G07020_001	Musa acuminata	GSMUA_Achr5G07020_001	I
GSMUA_Achr5G08840_001	Musa acuminata	GSMUA_Achr5G08840_001	I
GSMUA_Achr6G18180_001	Musa acuminata	GSMUA_Achr6G18180_001	I
GSMUA_Achr7G14960_001	Musa acuminata	GSMUA_Achr7G14960_001	I
GSMUA_Achr9G21580_001	Musa acuminata	GSMUA_Achr9G21580_001	I
GSMUA_AchrUn_randomG03720_001	Musa acuminata	GSMUA_AchrUn_randomG03720_001	I
LPERR01G31990	Leersia perrieri	LPERR01G31990	I
LPERR02G08020	Leersia perrieri	LPERR02G08020	I
LPERR03G01710	Leersia perrieri	LPERR03G01710	I
LPERR03G04270	Leersia perrieri	LPERR03G04270	I
LPERR03G24420	Leersia perrieri	LPERR03G24420	I
LPERR03G24430	Leersia perrieri	LPERR03G24430	I
LPERR03G27630	Leersia perrieri	LPERR03G27630	I
LPERR06G00490	Leersia perrieri	LPERR06G00490	I
LPERR06G15350	Leersia perrieri	LPERR06G15350	I
LPERR11G03280	Leersia perrieri	LPERR11G03280	I
LPERR12G16760	Leersia perrieri	LPERR12G16760	I
MLOC_18272	Hordeum vulgare	MLOC_18272	I
MLOC_36385	Hordeum vulgare	MLOC_36385	I
MLOC_3638	Hordeum vulgare	MLOC_3638	I
MLOC_53364	Hordeum vulgare	MLOC_53364	I
MLOC_5414	Hordeum vulgare	MLOC_5414	I
MLOC_58467	Hordeum vulgare	MLOC_58467	I
MLOC_62535	Hordeum vulgare	MLOC_62535	I
MLOC_66099	Hordeum vulgare	MLOC_66099	I
MLOC_68213	Hordeum vulgare	MLOC_68213	I
MLOC_78149	Hordeum vulgare	MLOC_78149	I
MTR_1g016490	Medicago truncatula	MTR_1g016490	I
MTR_1g057790	Medicago truncatula	MTR_1g057790	I
MTR_3g112290	Medicago truncatula	MTR_3g112290	I
MTR_4g019450	Medicago truncatula	MTR_4g019450	I
MTR_4g051532	Medicago truncatula	MTR_4g051532	I
MTR_5g018860	Medicago truncatula	MTR_5g018860	I
MTR_7g106320	Medicago truncatula	MTR_7g106320	I
MTR_8g078480	Medicago truncatula	MTR_8g078480	I
MTR_8g098815	Medicago truncatula	MTR_8g098815	I
OB01G45990	Oryza brachyantha	OB01G45990	I
OB03G11840	Oryza brachyantha	OB03G11840	I
OB03G14910	Oryza brachyantha	OB03G14910	I
OB03G36850	Oryza brachyantha	OB03G36850	I
OB03G36860	Oryza brachyantha	OB03G36860	I
OB03G40160	Oryza brachyantha	OB03G40160	I
OB05G26540	Oryza brachyantha	OB05G26540	I
OB06G26180	Oryza brachyantha	OB06G26180	I
OB11G13180	Oryza brachyantha	OB11G13180	I
OB12G26670	Oryza brachyantha	OB12G26670	I
OBART01G37260	Oryza barthii	OBART01G37260	I
OBART03G29670	Oryza barthii	OBART03G29670	I
OBART03G33050	Oryza barthii	OBART03G33050	I
OBART05G18940	Oryza barthii	OBART05G18940	I
OBART06G00550	Oryza barthii	OBART06G00550	I
OBART06G18620	Oryza barthii	OBART06G18620	I
OBART11G03800	Oryza barthii	OBART11G03800	I
OBART12G19980	Oryza barthii	OBART12G19980	I
OGLUM01G41200	Oryza glumaepatula	OGLUM01G41200	I
OGLUM03G04700	Oryza glumaepatula	OGLUM03G04700	I
OGLUM03G29930	Oryza glumaepatula	OGLUM03G29930	I
OGLUM03G32710	Oryza glumaepatula	OGLUM03G32710	I
OGLUM05G19970	Oryza glumaepatula	OGLUM05G19970	I
OGLUM06G00470	Oryza glumaepatula	OGLUM06G00470	I
OGLUM06G19730	Oryza glumaepatula	OGLUM06G19730	I
OGLUM11G03520	Oryza glumaepatula	OGLUM11G03520	I
OGLUM12G04370	Oryza glumaepatula	OGLUM12G04370	I
OGLUM12G21720	Oryza glumaepatula	OGLUM12G21720	I
OLONG_001344	Oryza longistaminata	OLONG_001344	I
OLONG_010053	Oryza longistaminata	OLONG_010053	I
OLONG_023229	Oryza longistaminata	OLONG_023229	I
OLONG_026943	Oryza longistaminata	OLONG_026943	I
OMERI01G34260	Oryza meridionalis	OMERI01G34260	I
OMERI02G10650	Oryza meridionalis	OMERI02G10650	I
OMERI03G01810	Oryza meridionalis	OMERI03G01810	I
OMERI03G04590	Oryza meridionalis	OMERI03G04590	I
OMERI03G29690	Oryza meridionalis	OMERI03G29690	I
OMERI05G16460	Oryza meridionalis	OMERI05G16460	I
OMERI06G18980	Oryza meridionalis	OMERI06G18980	I
OMERI11G03470	Oryza meridionalis	OMERI11G03470	I
OMERI12G01910	Oryza meridionalis	OMERI12G01910	I
OMERI12G14700	Oryza meridionalis	OMERI12G14700	I
ONIVA01G42140	Oryza nivara	ONIVA01G42140	I
ONIVA03G04660	Oryza nivara	ONIVA03G04660	I
ONIVA03G07310	Oryza nivara	ONIVA03G07310	I
ONIVA03G34560	Oryza nivara	ONIVA03G34560	I
ONIVA05G19780	Oryza nivara	ONIVA05G19780	I
ONIVA06G00550	Oryza nivara	ONIVA06G00550	I
ONIVA06G22300	Oryza nivara	ONIVA06G22300	I
ONIVA11G03780	Oryza nivara	ONIVA11G03780	I
ONIVA12G03330	Oryza nivara	ONIVA12G03330	I
OPUNC01G36100	Oryza punctata	OPUNC01G36100	I
OPUNC02G08420	Oryza punctata	OPUNC02G08420	I
OPUNC03G01710	Oryza punctata	OPUNC03G01710	I
OPUNC03G04600	Oryza punctata	OPUNC03G04600	I
OPUNC03G27010	Oryza punctata	OPUNC03G27010	I
OPUNC03G27020	Oryza punctata	OPUNC03G27020	I
OPUNC03G30190	Oryza punctata	OPUNC03G30190	I
OPUNC05G16530	Oryza punctata	OPUNC05G16530	I
OPUNC06G16860	Oryza punctata	OPUNC06G16860	I
OPUNC11G03550	Oryza punctata	OPUNC11G03550	I
OPUNC12G03540	Oryza punctata	OPUNC12G03540	I
OPUNC12G18250	Oryza punctata	OPUNC12G18250	I
OPUNC12G18270	Oryza punctata	OPUNC12G18270	I
ORGLA01G0311100	Oryza glaberrima	ORGLA01G0311100	I
ORGLA02G0084200	Oryza glaberrima	ORGLA02G0084200	I
ORGLA03G0016400	Oryza glaberrima	ORGLA03G0016400	I
ORGLA03G0046500	Oryza glaberrima	ORGLA03G0046500	I
ORGLA03G0273900	Oryza glaberrima	ORGLA03G0273900	I
ORGLA05G0163600	Oryza glaberrima	ORGLA05G0163600	I
ORGLA06G0005600	Oryza glaberrima	ORGLA06G0005600	I
ORGLA11G0035300	Oryza glaberrima	ORGLA11G0035300	I
ORGLA12G0172800	Oryza glaberrima	ORGLA12G0172800	I
ORUFI01G40590	Oryza rufipogon	ORUFI01G40590	I
ORUFI03G04600	Oryza rufipogon	ORUFI03G04600	I
ORUFI03G34420	Oryza rufipogon	ORUFI03G34420	I
ORUFI05G20120	Oryza rufipogon	ORUFI05G20120	I
ORUFI06G00570	Oryza rufipogon	ORUFI06G00570	I
ORUFI06G19620	Oryza rufipogon	ORUFI06G19620	I
ORUFI11G03720	Oryza rufipogon	ORUFI11G03720	I
ORUFI12G22300	Oryza rufipogon	ORUFI12G22300	I
OS01G0848400	Oryza sativa	OS01G0848400	I
OS02G0226600	Oryza sativa	OS02G0226600	I
OS03G0124000	Oryza sativa	OS03G0124000	I
OS03G0165300	Oryza sativa	OS03G0165300	I
OS03G0680800	Oryza sativa	OS03G0680800	I
OS03G0732100	Oryza sativa	OS03G0732100	I
OS05G0455200	Oryza sativa	OS05G0455200	I
OS06G0108900	Oryza sativa	OS06G0108900	I
OS06G0562300	Oryza sativa	OS06G0562300	I
OS11G0158600	Oryza sativa	OS11G0158600	I
OS12G0636200	Oryza sativa	OS12G0636200	I
PGSC0003DMG400003750	Solanum tuberosum	PGSC0003DMG400003750	I
PGSC0003DMG400005930	Solanum tuberosum	PGSC0003DMG400005930	I
PGSC0003DMG400010086	Solanum tuberosum	PGSC0003DMG400010086	I
PGSC0003DMG400012329	Solanum tuberosum	PGSC0003DMG400012329	I
PGSC0003DMG400019142	Solanum tuberosum	PGSC0003DMG400019142	I
PGSC0003DMG400019635	Solanum tuberosum	PGSC0003DMG400019635	I
PGSC0003DMG400021323	Solanum tuberosum	PGSC0003DMG400021323	I
PGSC0003DMG400024267	Solanum tuberosum	PGSC0003DMG400024267	I
PGSC0003DMG400029946	Solanum tuberosum	PGSC0003DMG400029946	I
PGSC0003DMG400030961	Solanum tuberosum	PGSC0003DMG400030961	I
POPTR_0001s22430	Populus trichocarpa	POPTR_0001s22430	I
POPTR_0004s16660	Populus trichocarpa	POPTR_0004s16660	I
POPTR_0004s22320	Populus trichocarpa	POPTR_0004s22320	I
POPTR_0005s13780	Populus trichocarpa	POPTR_0005s13780	I
POPTR_0006s21950	Populus trichocarpa	POPTR_0006s21950	I
POPTR_0006s24680	Populus trichocarpa	POPTR_0006s24680	I
POPTR_0007s12170	Populus trichocarpa	POPTR_0007s12170	I
POPTR_0008s06130	Populus trichocarpa	POPTR_0008s06130	I
POPTR_0009s02250	Populus trichocarpa	POPTR_0009s02250	I
POPTR_0009s12360	Populus trichocarpa	POPTR_0009s12360	I
POPTR_0010s20480	Populus trichocarpa	POPTR_0010s20480	I
POPTR_0018s05080	Populus trichocarpa	POPTR_0018s05080	I
PRUPE_ppa001286mg	Prunus persica	PRUPE_ppa001286mg	I
PRUPE_ppa001495mg	Prunus persica	PRUPE_ppa001495mg	I
PRUPE_ppa002081mg	Prunus persica	PRUPE_ppa002081mg	I
PRUPE_ppa002158mg	Prunus persica	PRUPE_ppa002158mg	I
PRUPE_ppa002499mg	Prunus persica	PRUPE_ppa002499mg	I
PRUPE_ppa002583mg	Prunus persica	PRUPE_ppa002583mg	I
PRUPE_ppa002604mg	Prunus persica	PRUPE_ppa002604mg	I
PRUPE_ppa003519mg	Prunus persica	PRUPE_ppa003519mg	I
PRUPE_ppa005361mg	Prunus persica	PRUPE_ppa005361mg	I
Sb01g009130	Sorghum bicolor	Sb01g009130	I
Sb01g011960	Sorghum bicolor	Sb01g011960	I
Sb01g030620	Sorghum bicolor	Sb01g030620	I
Sb01g046170	Sorghum bicolor	Sb01g046170	I
Sb03g039840	Sorghum bicolor	Sb03g039840	I
Sb04g008030	Sorghum bicolor	Sb04g008030	I
Sb05g003750	Sorghum bicolor	Sb05g003750	I
Sb08g022960	Sorghum bicolor	Sb08g022960	I
Sb10g000800	Sorghum bicolor	Sb10g000800	I
Sb10g022210	Sorghum bicolor	Sb10g022210	I
BLH4	Arabidopsis lyrata	scaffold_400362.1	I
BLH6	Arabidopsis lyrata	scaffold_700666.1	I
SELMODRAFT_414952	Selaginella moellendorffii	SELMODRAFT_414952	I
Si000753m.g	Setaria italica	Si000753m.g	I
Si006303m.g	Setaria italica	Si006303m.g	I
Si006358m.g	Setaria italica	Si006358m.g	I
Si016883m.g	Setaria italica	Si016883m.g	I
Si021436m.g	Setaria italica	Si021436m.g	I
Si026085m.g	Setaria italica	Si026085m.g	I
Si034602m.g	Setaria italica	Si034602m.g	I
Si034720m.g	Setaria italica	Si034720m.g	I
Si034832m.g	Setaria italica	Si034832m.g	I
Si034965m.g	Setaria italica	Si034965m.g	I
Solyc01g007070.2	Solanum lycopersicum	Solyc01g007070.2	I
Solyc01g109980.2	Solanum lycopersicum	Solyc01g109980.2	I
Solyc02g089940.2	Solanum lycopersicum	Solyc02g089940.2	I
Solyc06g074120.2	Solanum lycopersicum	Solyc06g074120.2	I
Solyc08g065420.2	Solanum lycopersicum	Solyc08g065420.2	I
Solyc08g081400.2	Solanum lycopersicum	Solyc08g081400.2	I
Solyc09g011380.2	Solanum lycopersicum	Solyc09g011380.2	I
Solyc10g086640.1	Solanum lycopersicum	Solyc10g086640.1	I
Solyc11g068950.1	Solanum lycopersicum	Solyc11g068950.1	I
TCM_000479	Theobroma cacao	TCM_000479	I
TCM_006827	Theobroma cacao	TCM_006827	I
TCM_016315	Theobroma cacao	TCM_016315	I
TCM_021834	Theobroma cacao	TCM_021834	I
TCM_022950	Theobroma cacao	TCM_022950	I
TCM_034117	Theobroma cacao	TCM_034117	I
TCM_037274	Theobroma cacao	TCM_037274	I
TCM_041235	Theobroma cacao	TCM_041235	I
TCM_042098	Theobroma cacao	TCM_042098	I
TCM_042663	Theobroma cacao	TCM_042663	I
Traes_1AL_D36224AD9	Triticum aestivum	Traes_1AL_D36224AD9	I
Traes_1BL_2DCDCD191	Triticum aestivum	Traes_1BL_2DCDCD191	I
TRAES3BF107700050CFD_g	Triticum aestivum	TRAES3BF107700050CFD_g	I
Traes_4AL_00DB56D41	Triticum aestivum	Traes_4AL_00DB56D41	I
Traes_4AL_21D75AE88	Triticum aestivum	Traes_4AL_21D75AE88	I
Traes_4AL_7B4A6F76A	Triticum aestivum	Traes_4AL_7B4A6F76A	I
Traes_4AS_4F615C5CC	Triticum aestivum	Traes_4AS_4F615C5CC	I
Traes_4BL_0F02B2343	Triticum aestivum	Traes_4BL_0F02B2343	I
Traes_4BL_6D714F995	Triticum aestivum	Traes_4BL_6D714F995	I
Traes_4BS_20BE06923	Triticum aestivum	Traes_4BS_20BE06923	I
Traes_4BS_3DB087DC8	Triticum aestivum	Traes_4BS_3DB087DC8	I
Traes_4BS_5156DD076	Triticum aestivum	Traes_4BS_5156DD076	I
Traes_4BS_6D714F995	Triticum aestivum	Traes_4BS_6D714F995	I
Traes_4DL_4164D3F4C	Triticum aestivum	Traes_4DL_4164D3F4C	I
Traes_4DL_5BB7F31ED	Triticum aestivum	Traes_4DL_5BB7F31ED	I
Traes_4DS_009CBDD14	Triticum aestivum	Traes_4DS_009CBDD14	I
Traes_4DS_35269C392	Triticum aestivum	Traes_4DS_35269C392	I
Traes_4DS_4BD85B5C7	Triticum aestivum	Traes_4DS_4BD85B5C7	I
Traes_4DS_581BE0CB7	Triticum aestivum	Traes_4DS_581BE0CB7	I
Traes_5AS_B2606FAD3	Triticum aestivum	Traes_5AS_B2606FAD3	I
Traes_5BS_210B7C3A4	Triticum aestivum	Traes_5BS_210B7C3A4	I
Traes_5DS_8E2AF4F8B	Triticum aestivum	Traes_5DS_8E2AF4F8B	I
Traes_7DS_86586E87F	Triticum aestivum	Traes_7DS_86586E87F	I
TRIUR3_05123	Triticum urartu	TRIUR3_05123	I
TRIUR3_16398	Triticum urartu	TRIUR3_16398	I
TRIUR3_18920	Triticum urartu	TRIUR3_18920	I
TRIUR3_26361	Triticum urartu	TRIUR3_26361	I
TRIUR3_28848	Triticum urartu	TRIUR3_28848	I
TRIUR3_30118	Triticum urartu	TRIUR3_30118	I
TRIUR3_32159	Triticum urartu	TRIUR3_32159	I
BEL1	Vitis vinifera	VIT_02s0025g00200	I
VIT_03s0038g00050	Vitis vinifera	VIT_03s0038g00050	I
ATH1	Vitis vinifera	VIT_04s0008g00880	I
VIT_04s0023g01020	Vitis vinifera	VIT_04s0023g01020	I
BLH5	Vitis vinifera	VIT_06s0009g00410	I
LSN	Vitis vinifera	VIT_08s0007g01290	I
BLH1	Vitis vinifera	VIT_08s0105g00230	I
VIT_13s0019g02450	Vitis vinifera	VIT_13s0019g02450	I
VIT_18s0001g11800	Vitis vinifera	VIT_18s0001g11800	I
BLH11	Vitis vinifera	VIT_18s0001g13130	I
Ca_00859	Cicer arietinum	Ca_00859	I
Ca_02095	Cicer arietinum	Ca_02095	I
Ca_04919	Cicer arietinum	Ca_04919	I
Ca_09180	Cicer arietinum	Ca_09180	I
Ca_14437	Cicer arietinum	Ca_14437	I
Ca_15192	Cicer arietinum	Ca_15192	I
Ca_16026	Cicer arietinum	Ca_16026	I
Ca_17482	Cicer arietinum	Ca_17482	I
Ca_21219	Cicer arietinum	Ca_21219	I
Ca_25873	Cicer arietinum	Ca_25873	I
Cla001806	Citrullus lanatus	Cla001806	I
Cla016850	Citrullus lanatus	Cla016850	I
Cla017896	Citrullus lanatus	Cla017896	I
Cla018449	Citrullus lanatus	Cla018449	I
Cla020476	Citrullus lanatus	Cla020476	I
Pm001057	Prunus mume	Pm001057	I
Pm001514	Prunus mume	Pm001514	I
Pm002609	Prunus mume	Pm002609	I
Pm005487	Prunus mume	Pm005487	I
Pm006291	Prunus mume	Pm006291	I
Pm021823	Prunus mume	Pm021823	I
Pm026023	Prunus mume	Pm026023	I
29333.m001039	Ricinus communis	29333.m001039	I
29638.m000515	Ricinus communis	29638.m000515	I
29973.m000390	Ricinus communis	29973.m000390	I
30131.m007089	Ricinus communis	30131.m007089	I
30143.m001209	Ricinus communis	30143.m001209	I
30170.m014099	Ricinus communis	30170.m014099	I
30190.m011257	Ricinus communis	30190.m011257	I
cassava17913.valid.m1	Manihot esculenta	cassava17913.valid.m1	I
cassava21874.m1	Manihot esculenta	cassava21874.m1	I
cassava2208.valid.m1	Manihot esculenta	cassava2208.valid.m1	I
cassava2237.valid.m1	Manihot esculenta	cassava2237.valid.m1	I
cassava23875.valid.m1	Manihot esculenta	cassava23875.valid.m1	I
cassava24236.valid.m1	Manihot esculenta	cassava24236.valid.m1	I
cassava24237.valid.m1	Manihot esculenta	cassava24237.valid.m1	I
cassava24238.valid.m1	Manihot esculenta	cassava24238.valid.m1	I
cassava24239.valid.m1	Manihot esculenta	cassava24239.valid.m1	I
cassava24240.valid.m1	Manihot esculenta	cassava24240.valid.m1	I
cassava25006.valid.m1	Manihot esculenta	cassava25006.valid.m1	I
cassava25008.valid.m1	Manihot esculenta	cassava25008.valid.m1	I
cassava25009.valid.m1	Manihot esculenta	cassava25009.valid.m1	I
cassava30214.valid.m1	Manihot esculenta	cassava30214.valid.m1	I
cassava34597.m1	Manihot esculenta	cassava34597.m1	I
cassava36014.valid.m1	Manihot esculenta	cassava36014.valid.m1	I
cassava42275.valid.m1	Manihot esculenta	cassava42275.valid.m1	I
cassava45059.m1	Manihot esculenta	cassava45059.m1	I
cassava7169.valid.m1	Manihot esculenta	cassava7169.valid.m1	I
cassava7170.valid.m1	Manihot esculenta	cassava7170.valid.m1	I
Cucsa.066610	Cucumis sativus	Cucsa.066610	I
Cucsa.101830	Cucumis sativus	Cucsa.101830	I
Cucsa.109320	Cucumis sativus	Cucsa.109320	I
Cucsa.175830	Cucumis sativus	Cucsa.175830	I
Cucsa.185900	Cucumis sativus	Cucsa.185900	I
Cucsa.241880	Cucumis sativus	Cucsa.241880	I
Cucsa.303380	Cucumis sativus	Cucsa.303380	I
Cucsa.366600	Cucumis sativus	Cucsa.366600	I
fgenesh1_pg.scaffold_220000039	Physcomitrella patens	fgenesh1_pg.scaffold_220000039	I
fgenesh1_pg.scaffold_258000001	Physcomitrella patens	fgenesh1_pg.scaffold_258000001	I
mgf001720m	Mimulus guttatus	mgf001720m	I
mgf001783m	Mimulus guttatus	mgf001783m	I
mgf003720m	Mimulus guttatus	mgf003720m	I
mgf009310m	Mimulus guttatus	mgf009310m	I
mgf009413m	Mimulus guttatus	mgf009413m	I
mgf014297m	Mimulus guttatus	mgf014297m	I
mgf017722m	Mimulus guttatus	mgf017722m	I
Aquca_001_00106	Aquilegia coerulea	Aquca_001_00106	I
Aquca_007_00122	Aquilegia coerulea	Aquca_007_00122	I
Aquca_007_00311	Aquilegia coerulea	Aquca_007_00311	I
Aquca_009_00697	Aquilegia coerulea	Aquca_009_00697	I
Aquca_010_00398	Aquilegia coerulea	Aquca_010_00398	I
Aquca_010_00581	Aquilegia coerulea	Aquca_010_00581	I
Aquca_038_00103	Aquilegia coerulea	Aquca_038_00103	I
Bostr.23794s0501	Boechera stricta	Bostr.23794s0501	I
Bostr.27895s0119	Boechera stricta	Bostr.27895s0119	I
Bostr.3288s0196	Boechera stricta	Bostr.3288s0196	I
Bostr.7200s0155	Boechera stricta	Bostr.7200s0155	I
Bostr.7867s1149	Boechera stricta	Bostr.7867s1149	I
Bostr.7867s1322	Boechera stricta	Bostr.7867s1322	I
Bostr.7867s1543	Boechera stricta	Bostr.7867s1543	I
Cagra.0993s0106	Capsella grandiflora	Cagra.0993s0106	I
Cagra.1873s0010	Capsella grandiflora	Cagra.1873s0010	I
Cagra.2350s0011	Capsella grandiflora	Cagra.2350s0011	I
Cagra.4093s0028	Capsella grandiflora	Cagra.4093s0028	I
Cagra.4909s0013	Capsella grandiflora	Cagra.4909s0013	I
Cagra.5224s0008	Capsella grandiflora	Cagra.5224s0008	I
Carubv10004235m.g	Capsella rubella	Carubv10004235m.g	I
Carubv10004359m.g	Capsella rubella	Carubv10004359m.g	I
Carubv10004551m.g	Capsella rubella	Carubv10004551m.g	I
Carubv10004743m.g	Capsella rubella	Carubv10004743m.g	I
Carubv10022772m.g	Capsella rubella	Carubv10022772m.g	I
Carubv10022787m.g	Capsella rubella	Carubv10022787m.g	I
Ciclev10010212m.g	Citrus clementina	Ciclev10010212m.g	I
Ciclev10011201m.g	Citrus clementina	Ciclev10011201m.g	I
Ciclev10011268m.g	Citrus clementina	Ciclev10011268m.g	I
Ciclev10019130m.g	Citrus clementina	Ciclev10019130m.g	I
Ciclev10024897m.g	Citrus clementina	Ciclev10024897m.g	I
Ciclev10027952m.g	Citrus clementina	Ciclev10027952m.g	I
Ciclev10027955m.g	Citrus clementina	Ciclev10027955m.g	I
Eucgr.A02588	Eucalyptus grandis	Eucgr.A02588	I
Eucgr.C03024	Eucalyptus grandis	Eucgr.C03024	I
Eucgr.D01826	Eucalyptus grandis	Eucgr.D01826	I
Eucgr.G01703	Eucalyptus grandis	Eucgr.G01703	I
Eucgr.I01293	Eucalyptus grandis	Eucgr.I01293	I
Eucgr.I02488	Eucalyptus grandis	Eucgr.I02488	I
Eucgr.J00574	Eucalyptus grandis	Eucgr.J00574	I
Eucgr.K03046	Eucalyptus grandis	Eucgr.K03046	I
evm.TU.supercontig_104.27	Carica papaya	evm.TU.supercontig_104.27	I
gene15201-v1.0-hybrid	Fragaria vesca	gene15201-v1.0-hybrid	I
gene18314-v1.0-hybrid	Fragaria vesca	gene18314-v1.0-hybrid	I
gene21861-v1.0-hybrid	Fragaria vesca	gene21861-v1.0-hybrid	I
gene29414-v1.0-hybrid	Fragaria vesca	gene29414-v1.0-hybrid	I
Gorai.001G023100	Gossypium raimondii	Gorai.001G023100	I
Gorai.001G125400	Gossypium raimondii	Gorai.001G125400	I
Gorai.002G234900	Gossypium raimondii	Gorai.002G234900	I
Gorai.002G255800	Gossypium raimondii	Gorai.002G255800	I
Gorai.003G018100	Gossypium raimondii	Gorai.003G018100	I
Gorai.003G156000	Gossypium raimondii	Gorai.003G156000	I
Gorai.004G139300	Gossypium raimondii	Gorai.004G139300	I
Gorai.005G246400	Gossypium raimondii	Gorai.005G246400	I
Gorai.006G115600	Gossypium raimondii	Gorai.006G115600	I
Gorai.006G149100	Gossypium raimondii	Gorai.006G149100	I
Gorai.007G207200	Gossypium raimondii	Gorai.007G207200	I
Gorai.008G248900	Gossypium raimondii	Gorai.008G248900	I
Gorai.009G109300	Gossypium raimondii	Gorai.009G109300	I
Gorai.009G198500	Gossypium raimondii	Gorai.009G198500	I
Gorai.009G396900	Gossypium raimondii	Gorai.009G396900	I
Gorai.010G007700	Gossypium raimondii	Gorai.010G007700	I
Gorai.011G271200	Gossypium raimondii	Gorai.011G271200	I
Gorai.012G108300	Gossypium raimondii	Gorai.012G108300	I
Gorai.013G034600	Gossypium raimondii	Gorai.013G034600	I
Lus10000184.g	Linum usitatissimum	Lus10000184.g	I
Lus10004201.g	Linum usitatissimum	Lus10004201.g	I
Lus10013579.g	Linum usitatissimum	Lus10013579.g	I
Lus10016790.g	Linum usitatissimum	Lus10016790.g	I
Lus10017481.g	Linum usitatissimum	Lus10017481.g	I
Lus10021498.g	Linum usitatissimum	Lus10021498.g	I
Lus10022485.g	Linum usitatissimum	Lus10022485.g	I
Lus10022599.g	Linum usitatissimum	Lus10022599.g	I
Lus10028802.g	Linum usitatissimum	Lus10028802.g	I
Lus10029405.g	Linum usitatissimum	Lus10029405.g	I
Lus10040256.g	Linum usitatissimum	Lus10040256.g	I
MDP0000126587	Malus domestica	MDP0000126587	I
MDP0000128214	Malus domestica	MDP0000128214	I
MDP0000143173	Malus domestica	MDP0000143173	I
MDP0000166587	Malus domestica	MDP0000166587	I
MDP0000209399	Malus domestica	MDP0000209399	I
MDP0000239684	Malus domestica	MDP0000239684	I
MDP0000248279	Malus domestica	MDP0000248279	I
MDP0000255392	Malus domestica	MDP0000255392	I
MDP0000272542	Malus domestica	MDP0000272542	I
MDP0000304106	Malus domestica	MDP0000304106	I
MDP0000429775	Malus domestica	MDP0000429775	I
MDP0000546502	Malus domestica	MDP0000546502	I
MDP0000841379	Malus domestica	MDP0000841379	I
orange1.1g003323m.g	Citrus sinensis	orange1.1g003323m.g	I
orange1.1g005058m.g	Citrus sinensis	orange1.1g005058m.g	I
orange1.1g005514m.g	Citrus sinensis	orange1.1g005514m.g	I
orange1.1g005901m.g	Citrus sinensis	orange1.1g005901m.g	I
orange1.1g006550m.g	Citrus sinensis	orange1.1g006550m.g	I
orange1.1g007660m.g	Citrus sinensis	orange1.1g007660m.g	I
orange1.1g038021m.g	Citrus sinensis	orange1.1g038021m.g	I
Pavir.Aa02885	Panicum virgatum	Pavir.Aa02885	I
Pavir.Ab00820	Panicum virgatum	Pavir.Ab00820	I
Pavir.Ca02930	Panicum virgatum	Pavir.Ca02930	I
Pavir.Da00778	Panicum virgatum	Pavir.Da00778	I
Pavir.Db01271	Panicum virgatum	Pavir.Db01271	I
Pavir.Ea00566	Panicum virgatum	Pavir.Ea00566	I
Pavir.Ha01822	Panicum virgatum	Pavir.Ha01822	I
Pavir.Hb01912	Panicum virgatum	Pavir.Hb01912	I
Pavir.Ia00690	Panicum virgatum	Pavir.Ia00690	I
Pavir.Ia00978	Panicum virgatum	Pavir.Ia00978	I
Pavir.Ia02908	Panicum virgatum	Pavir.Ia02908	I
Pavir.Ia04290	Panicum virgatum	Pavir.Ia04290	I
Pavir.Ib00072	Panicum virgatum	Pavir.Ib00072	I
Pavir.Ib04256	Panicum virgatum	Pavir.Ib04256	I
Pavir.J15357	Panicum virgatum	Pavir.J15357	I
SapurV1A.0006s0120	Salix purpurea	SapurV1A.0006s0120	I
SapurV1A.0086s0160	Salix purpurea	SapurV1A.0086s0160	I
SapurV1A.0098s0250	Salix purpurea	SapurV1A.0098s0250	I
SapurV1A.0146s0010	Salix purpurea	SapurV1A.0146s0010	I
SapurV1A.0214s0100	Salix purpurea	SapurV1A.0214s0100	I
SapurV1A.0216s0040	Salix purpurea	SapurV1A.0216s0040	I
SapurV1A.0224s0160	Salix purpurea	SapurV1A.0224s0160	I
SapurV1A.0319s0040	Salix purpurea	SapurV1A.0319s0040	I
SapurV1A.0432s0150	Salix purpurea	SapurV1A.0432s0150	I
SapurV1A.0585s0110	Salix purpurea	SapurV1A.0585s0110	I
SapurV1A.0670s0090	Salix purpurea	SapurV1A.0670s0090	I
SapurV1A.0681s0020	Salix purpurea	SapurV1A.0681s0020	I
SapurV1A.1014s0020	Salix purpurea	SapurV1A.1014s0020	I
SapurV1A.1280s0040	Salix purpurea	SapurV1A.1280s0040	I
SapurV1A.1412s0040	Salix purpurea	SapurV1A.1412s0040	I
SapurV1A.2239s0010	Salix purpurea	SapurV1A.2239s0010	I
SapurV1A.5356s0010	Salix purpurea	SapurV1A.5356s0010	I
Thhalv10000076m.g	Eutrema salsugineum	Thhalv10000076m.g	I
Thhalv10016349m.g	Eutrema salsugineum	Thhalv10016349m.g	I
Thhalv10018958m.g	Eutrema salsugineum	Thhalv10018958m.g	I
Thhalv10022660m.g	Eutrema salsugineum	Thhalv10022660m.g	I
Thhalv10024509m.g	Eutrema salsugineum	Thhalv10024509m.g	I
Thhalv10024906m.g	Eutrema salsugineum	Thhalv10024906m.g	I
Thhalv10025083m.g	Eutrema salsugineum	Thhalv10025083m.g	I
Thhalv10027690m.g	Eutrema salsugineum	Thhalv10027690m.g	I
PK12638.1	Cannabis sativa	PK12638.1	I
PK13537.1	Cannabis sativa	PK13537.1	I
PK14089.1	Cannabis sativa	PK14089.1	I
PK16496.1	Cannabis sativa	PK16496.1	I
PK19496.1	Cannabis sativa	PK19496.1	I
PK20180.1	Cannabis sativa	PK20180.1	I
PK25203.1	Cannabis sativa	PK25203.1	I
chr1.CM0147.1110.nd	Lotus japonicus	chr1.CM0147.1110.nd	I
chr1.CM0361.290.nc	Lotus japonicus	chr1.CM0361.290.nc	I
chr2.CM0323.330.nc	Lotus japonicus	chr2.CM0323.330.nc	I
chr4.CM0501.80.nd	Lotus japonicus	chr4.CM0501.80.nd	I
LjSGA_061861.1	Lotus japonicus	LjSGA_061861.1	I
PDK_20s1306551g001	Phoenix dactylifera	PDK_20s1306551g001	I
PDK_20s1310391g002	Phoenix dactylifera	PDK_20s1310391g002	I
PDK_20s1324881g001	Phoenix dactylifera	PDK_20s1324881g001	I
PDK_20s1374041g001	Phoenix dactylifera	PDK_20s1374041g001	I
PDK_20s1584091g001	Phoenix dactylifera	PDK_20s1584091g001	I
PDK_20s1614221g001	Phoenix dactylifera	PDK_20s1614221g001	I
PDK_20s1644411g002	Phoenix dactylifera	PDK_20s1644411g002	I
GSMUA_Achr4G02680_001	Musa acuminata	GSMUA_Achr4G02680_001	N
GSMUA_Achr4G12180_001	Musa acuminata	GSMUA_Achr4G12180_001	N
MTR_2g095050	Medicago truncatula	MTR_2g095050	N
OB12G13660	Oryza brachyantha	OB12G13660	N
POPTR_0002s03240	Populus trichocarpa	POPTR_0002s03240	N
SELMODRAFT_48157	Selaginella moellendorffii	SELMODRAFT_48157	N
SELMODRAFT_68227	Selaginella moellendorffii	SELMODRAFT_68227	N
Cla023019	Citrullus lanatus	Cla023019	N
Cucsa.395170	Cucumis sativus	Cucsa.395170	N
Ciclev10033544m.g	Citrus clementina	Ciclev10033544m.g	N
evm.TU.supercontig_195.45	Carica papaya	evm.TU.supercontig_195.45	N
evm.TU.supercontig_78.15	Carica papaya	evm.TU.supercontig_78.15	N
gene02674-v1.0-hybrid	Fragaria vesca	gene02674-v1.0-hybrid	N
MDP0000130825	Malus domestica	MDP0000130825	N
orange1.1g040555m.g	Citrus sinensis	orange1.1g040555m.g	N
SapurV1A.0006s0130	Salix purpurea	SapurV1A.0006s0130	N
Thhalv10002247m.g	Eutrema salsugineum	Thhalv10002247m.g	N
PK17736.1	Cannabis sativa	PK17736.1	N

estExt_GenewiseH_1.C_530082 (Branchiostoma floridae) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

5786 Related TFs

estExt_GenewiseH_1.C_530082 **(Branchiostoma floridae)
Homeodomain**