estExt_gwp.C_860189 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_gwp.C_860189 T227440_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp.C_860189 Homeodomain 77 126

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I
TCM_007543 Theobroma cacao TCM_007543 I
Gorai.013G063500 Gossypium raimondii Gorai.013G063500 N
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N
Cucsa.345830 Cucumis sativus Cucsa.345830 N
Aquca_022_00269 Aquilegia coerulea Aquca_022_00269 N
Bostr.0568s0345 Boechera stricta Bostr.0568s0345 N
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N
Carubv10027198m.g Capsella rubella Carubv10027198m.g N
Ciclev10002538m.g Citrus clementina Ciclev10002538m.g N
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N
Gorai.005G217400 Gossypium raimondii Gorai.005G217400 N
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N
Pm004078 Prunus mume Pm004078 N
Lus10000206.g Linum usitatissimum Lus10000206.g N
Lus10010747.g Linum usitatissimum Lus10010747.g N
Lus10035647.g Linum usitatissimum Lus10035647.g N
Lus10035648.g Linum usitatissimum Lus10035648.g N
MDP0000240094 Malus domestica MDP0000240094 N
MDP0000250487 Malus domestica MDP0000250487 N
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N
PK12901.1 Cannabis sativa PK12901.1 N
chr4.CM0337.760.nc Lotus japonicus chr4.CM0337.760.nc N
chr6.CM0314.510.nd Lotus japonicus chr6.CM0314.510.nd N
MTR_4g094302 Medicago truncatula MTR_4g094302 N
Bo2g166280 Brassica oleracea Bo2g166280 N
Bo3g101220 Brassica oleracea Bo3g101220 N
Bo9g018140 Brassica oleracea Bo9g018140 N
Bra024306 Brassica rapa Bra024306 N
Bra031915 Brassica rapa Bra031915 N
Bra037779 Brassica rapa Bra037779 N
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N
GLYMA05G24910 Glycine max GLYMA05G24910 N
GLYMA08G08010 Glycine max GLYMA08G08010 N
GLYMA08G19300 Glycine max GLYMA08G19300 N
GLYMA15G05690 Glycine max GLYMA15G05690 N
29683.m000467 Ricinus communis 29683.m000467 N
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N
VIT_04s0044g01500 Vitis vinifera VIT_04s0044g01500 N
ANAC104 Vitis vinifera VIT_12s0055g00510 N
Ca_05227 Cicer arietinum Ca_05227 N
Cla009592 Citrullus lanatus Cla009592 N
NAC104 Arabidopsis thaliana AT5G64530 N