CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm004078
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm004078
T296622_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm004078
NAC/NAM
9
131
PPGFRFDPTDEELVVHFLQRKAALLPFHPDVIPDLHLYPYDPWELDGKALREGNKWYFYSRRTQNRVTSNGYWKALGVEEPVITRSSCNSTHKVGMKRYLAFYVGEAPNSGIKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa019508mg
Prunus persica
PRUPE_ppa019508mg
N
0.979
TCM_007543
Theobroma cacao
TCM_007543
I
0.959
MDP0000240094
Malus domestica
MDP0000240094
N
0.959
MDP0000250487
Malus domestica
MDP0000250487
N
0.956
PGSC0003DMG400029741
Solanum tuberosum
PGSC0003DMG400029741
N
0.953
Solyc01g104900.2
Solanum lycopersicum
Solyc01g104900.2
N
0.951
Lus10000206.g
Linum usitatissimum
Lus10000206.g
N
0.950
Lus10010747.g
Linum usitatissimum
Lus10010747.g
N
0.950
Lus10035647.g
Linum usitatissimum
Lus10035647.g
N
0.950
Lus10035648.g
Linum usitatissimum
Lus10035648.g
N
0.950
NAC104
Arabidopsis thaliana
AT5G64530
N
0.946
Bo3g101220
Brassica oleracea
Bo3g101220
N
0.946
Bra024306
Brassica rapa
Bra024306
N
0.946
ANAC104
Arabidopsis lyrata
fgenesh2_kg.8__2481__AT5G64530.1
N
0.946
Bostr.0568s0345
Boechera stricta
Bostr.0568s0345
N
0.946
Bo2g166280
Brassica oleracea
Bo2g166280
N
0.945
Bra031915
Brassica rapa
Bra031915
N
0.945
chr4.CM0337.760.nc
Lotus japonicus
chr4.CM0337.760.nc
N
0.944
Bra037779
Brassica rapa
Bra037779
N
0.941
Gorai.005G217400
Gossypium raimondii
Gorai.005G217400
N
0.941
Bo9g018140
Brassica oleracea
Bo9g018140
N
0.939
Cagra.0248s0135
Capsella grandiflora
Cagra.0248s0135
N
0.939
Carubv10027198m.g
Capsella rubella
Carubv10027198m.g
N
0.939
Cla009592
Citrullus lanatus
Cla009592
N
0.938
GLYMA15G05690
Glycine max
GLYMA15G05690
N
0.937
Cucsa.345830
Cucumis sativus
Cucsa.345830
N
0.937
chr6.CM0314.510.nd
Lotus japonicus
chr6.CM0314.510.nd
N
0.937
ANAC104
Vitis vinifera
VIT_12s0055g00510
N
0.936
GLYMA08G08010
Glycine max
GLYMA08G08010
N
0.935
29683.m000467
Ricinus communis
29683.m000467
N
0.934
Aquca_022_00269
Aquilegia coerulea
Aquca_022_00269
N
0.934
GLYMA05G24910
Glycine max
GLYMA05G24910
N
0.933
Gorai.008G014700
Gossypium raimondii
Gorai.008G014700
N
0.930
GLYMA08G19300
Glycine max
GLYMA08G19300
N
0.928
POPTR_0003s01720
Populus trichocarpa
POPTR_0003s01720
N
0.925
Gorai.013G063500
Gossypium raimondii
Gorai.013G063500
N
0.916
cassava1502.valid.m1
Manihot esculenta
cassava1502.valid.m1
N
0.915
POPTR_0001s21440
Populus trichocarpa
POPTR_0001s21440
N
0.912
Eucgr.I02695
Eucalyptus grandis
Eucgr.I02695
N
0.907
Thhalv10004805m.g
Eutrema salsugineum
Thhalv10004805m.g
N
0.903
MTR_4g094302
Medicago truncatula
MTR_4g094302
N
0.901
Solyc10g047060.1
Solanum lycopersicum
Solyc10g047060.1
N
0.901
GLYMA07G31220
Glycine max
GLYMA07G31220
I
0.894
PGSC0003DMG400005501
Solanum tuberosum
PGSC0003DMG400005501
N
0.894
PK12901.1
Cannabis sativa
PK12901.1
N
0.892
VIT_04s0044g01500
Vitis vinifera
VIT_04s0044g01500
N
0.889
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.889
evm.TU.supercontig_63.29
Carica papaya
evm.TU.supercontig_63.29
N
0.888
Ciclev10002538m.g
Citrus clementina
Ciclev10002538m.g
N
0.884
orange1.1g029016m.g
Citrus sinensis
orange1.1g029016m.g
N
0.884
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.884
Bo6g030920
Brassica oleracea
Bo6g030920
I
0.882
Bra018997
Brassica rapa
Bra018997
I
0.882
Thhalv10012308m.g
Eutrema salsugineum
Thhalv10012308m.g
I
0.881
POPTR_0007s04250
Populus trichocarpa
POPTR_0007s04250
N
0.876
GLYMA06G15990
Glycine max
GLYMA06G15990
N
0.873
Ca_05227
Cicer arietinum
Ca_05227
N
0.873
Lus10011215.g
Linum usitatissimum
Lus10011215.g
I
0.872
Lus10018469.g
Linum usitatissimum
Lus10018469.g
I
0.872
anac025
Vitis vinifera
VIT_00s0375g00040
I
0.871