CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400005501
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400005501
T295103_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400014030
NAC/NAM
10
129
PPGFWFCPSDEELIVHFLHRKISLLPCHPDVIPDLHLHHYDPWDLDGKAMTGGNKWYFYSRRTHETSRITNNGYWKPLGVDETILSTSNHNLGMKKYYTFYMGQPPQGHKTNWLMQEYSH
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc10g047060.1
Solanum lycopersicum
Solyc10g047060.1
N
0.978
Ciclev10002538m.g
Citrus clementina
Ciclev10002538m.g
N
0.906
orange1.1g029016m.g
Citrus sinensis
orange1.1g029016m.g
N
0.906
POPTR_0003s01720
Populus trichocarpa
POPTR_0003s01720
N
0.899
PGSC0003DMG400029741
Solanum tuberosum
PGSC0003DMG400029741
N
0.898
Gorai.008G014700
Gossypium raimondii
Gorai.008G014700
N
0.897
PRUPE_ppa019508mg
Prunus persica
PRUPE_ppa019508mg
N
0.894
Pm004078
Prunus mume
Pm004078
N
0.894
Solyc01g104900.2
Solanum lycopersicum
Solyc01g104900.2
N
0.888
POPTR_0001s21440
Populus trichocarpa
POPTR_0001s21440
N
0.886
TCM_007543
Theobroma cacao
TCM_007543
I
0.880