CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g047060.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc10g047060.1
T295892_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g047060.1.1
NAC/NAM
21
140
PPGFWFCPSDEELIVHFLHRKISLLPFHPDVIPDLHLHSYDPWDLDGKAMSGGNKWYFYSRRTHETTRITSNGYWKSLGVDETILSTSNHNLGMKKYYTFYMGQPPQGHKTNWLMQEYSH
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400005501
Solanum tuberosum
PGSC0003DMG400005501
N
0.978
PGSC0003DMG400029741
Solanum tuberosum
PGSC0003DMG400029741
N
0.902
PRUPE_ppa019508mg
Prunus persica
PRUPE_ppa019508mg
N
0.901
Pm004078
Prunus mume
Pm004078
N
0.901
Solyc01g104900.2
Solanum lycopersicum
Solyc01g104900.2
N
0.892
Ciclev10002538m.g
Citrus clementina
Ciclev10002538m.g
N
0.892
orange1.1g029016m.g
Citrus sinensis
orange1.1g029016m.g
N
0.892
Gorai.008G014700
Gossypium raimondii
Gorai.008G014700
N
0.881
POPTR_0003s01720
Populus trichocarpa
POPTR_0003s01720
N
0.880
POPTR_0001s21440
Populus trichocarpa
POPTR_0001s21440
N
0.871