CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g166280
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo2g166280
T292339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g166280.1
NAC/NAM
4
118
PPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPYDPWDLPGKALQEGRQWYFYSRKTQERVTSNGYWGSMGIDEPIFTSSTHKKVGIKNYLTFYLGDSQTNWVMQEYSL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra031915
Brassica rapa
Bra031915
N
0.977
NAC104
Arabidopsis thaliana
AT5G64530
N
0.976
Bo3g101220
Brassica oleracea
Bo3g101220
N
0.976
Bra024306
Brassica rapa
Bra024306
N
0.976
ANAC104
Arabidopsis lyrata
fgenesh2_kg.8__2481__AT5G64530.1
N
0.976
Bostr.0568s0345
Boechera stricta
Bostr.0568s0345
N
0.976
Cagra.0248s0135
Capsella grandiflora
Cagra.0248s0135
N
0.972
Carubv10027198m.g
Capsella rubella
Carubv10027198m.g
N
0.972
Bra037779
Brassica rapa
Bra037779
N
0.971
Bo9g018140
Brassica oleracea
Bo9g018140
N
0.970
Lus10000206.g
Linum usitatissimum
Lus10000206.g
N
0.966
Lus10010747.g
Linum usitatissimum
Lus10010747.g
N
0.966
Lus10035647.g
Linum usitatissimum
Lus10035647.g
N
0.966
Lus10035648.g
Linum usitatissimum
Lus10035648.g
N
0.966
TCM_007543
Theobroma cacao
TCM_007543
I
0.959
Thhalv10004805m.g
Eutrema salsugineum
Thhalv10004805m.g
N
0.958
Solyc01g104900.2
Solanum lycopersicum
Solyc01g104900.2
N
0.956
Cucsa.345830
Cucumis sativus
Cucsa.345830
N
0.955
MDP0000240094
Malus domestica
MDP0000240094
N
0.954
PGSC0003DMG400029741
Solanum tuberosum
PGSC0003DMG400029741
N
0.953
Cla009592
Citrullus lanatus
Cla009592
N
0.953
MDP0000250487
Malus domestica
MDP0000250487
N
0.949
PRUPE_ppa019508mg
Prunus persica
PRUPE_ppa019508mg
N
0.945
Pm004078
Prunus mume
Pm004078
N
0.945
GLYMA08G08010
Glycine max
GLYMA08G08010
N
0.942
Gorai.005G217400
Gossypium raimondii
Gorai.005G217400
N
0.941
chr6.CM0314.510.nd
Lotus japonicus
chr6.CM0314.510.nd
N
0.941
GLYMA05G24910
Glycine max
GLYMA05G24910
N
0.940
Eucgr.I02695
Eucalyptus grandis
Eucgr.I02695
N
0.940
ANAC104
Vitis vinifera
VIT_12s0055g00510
N
0.938
chr4.CM0337.760.nc
Lotus japonicus
chr4.CM0337.760.nc
N
0.938
GLYMA15G05690
Glycine max
GLYMA15G05690
N
0.936
29683.m000467
Ricinus communis
29683.m000467
N
0.935
Aquca_022_00269
Aquilegia coerulea
Aquca_022_00269
N
0.932
POPTR_0003s01720
Populus trichocarpa
POPTR_0003s01720
N
0.929
GLYMA08G19300
Glycine max
GLYMA08G19300
N
0.927
VIT_04s0044g01500
Vitis vinifera
VIT_04s0044g01500
N
0.925
Gorai.008G014700
Gossypium raimondii
Gorai.008G014700
N
0.923
POPTR_0001s21440
Populus trichocarpa
POPTR_0001s21440
N
0.920
cassava1502.valid.m1
Manihot esculenta
cassava1502.valid.m1
N
0.915
Ciclev10002538m.g
Citrus clementina
Ciclev10002538m.g
N
0.915
orange1.1g029016m.g
Citrus sinensis
orange1.1g029016m.g
N
0.915
PK12901.1
Cannabis sativa
PK12901.1
N
0.913
MTR_4g094302
Medicago truncatula
MTR_4g094302
N
0.903
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.900
Gorai.013G063500
Gossypium raimondii
Gorai.013G063500
N
0.894
POPTR_0007s04250
Populus trichocarpa
POPTR_0007s04250
N
0.892
evm.TU.supercontig_63.29
Carica papaya
evm.TU.supercontig_63.29
N
0.888
GLYMA06G15990
Glycine max
GLYMA06G15990
N
0.886
Ca_05227
Cicer arietinum
Ca_05227
N
0.881
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.873