Ciclev10024310m.g (Citrus clementina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ciclev10024310m.g T228413_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_01217
M02056_2.00 		Aspergillus nidulans
NWTATHDNNN
NNNHDATAWN		 PBM
Weirauch et al.(2014)
pTH5818 		0.603 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10024310m Homeodomain 68 124

Links

Other Homeodomain family TFs
Other Citrus clementina TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TBX15 Homo sapiens ENSG00000092607 D 0.000
TBX18 Homo sapiens ENSG00000112837 D 0.000
TBX22 Homo sapiens ENSG00000122145 D 0.000
TBX20 Homo sapiens ENSG00000164532 D 0.000
Tbx20 Mus musculus ENSMUSG00000031965 D 0.000
mid Drosophila melanogaster FBgn0261963 D 0.000
AAEL008337 Aedes aegypti AAEL008337 I 0.000
AGAP008563 Anopheles gambiae AGAP008563 I 0.000
AGAP008569 Anopheles gambiae AGAP008569 I 0.000
DAPPUDRAFT_59354 Daphnia pulex DAPPUDRAFT_59354 I 0.000
DAPPUDRAFT_59366 Daphnia pulex DAPPUDRAFT_59366 I 0.000
TBX18 Anolis carolinensis ENSACAG00000003859 I 0.000
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.000
TBX15 Anolis carolinensis ENSACAG00000008131 I 0.000
ENSAMEG00000005830 Ailuropoda melanoleuca ENSAMEG00000005830 I 0.000
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I 0.000
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I 0.000
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.000
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I 0.000
ENSAMXG00000005724 Astyanax mexicanus ENSAMXG00000005724 I 0.000
ENSAMXG00000013612 Astyanax mexicanus ENSAMXG00000013612 I 0.000
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I 0.000
TBX20 Bos taurus ENSBTAG00000017541 I 0.000
TBX18 Bos taurus ENSBTAG00000018161 I 0.000
TBX22 Bos taurus ENSBTAG00000048060 I 0.000
TBX18 Canis familiaris ENSCAFG00000002987 I 0.000
TBX15 Canis familiaris ENSCAFG00000009976 I 0.000
TBX20 Canis familiaris ENSCAFG00000028536 I 0.000
tbx20 Ciona intestinalis ENSCING00000005267 I 0.000
TBX15 Callithrix jacchus ENSCJAG00000005662 I 0.000
TBX22 Callithrix jacchus ENSCJAG00000009617 I 0.000
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.000
TBX18 Callithrix jacchus ENSCJAG00000015218 I 0.000
TBX15 Cavia porcellus ENSCPOG00000000615 I 0.000
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I 0.000
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.000
ENSCSAG00000001712 Chlorocebus sabaeus ENSCSAG00000001712 I 0.000
ENSCSAG00000010713 Chlorocebus sabaeus ENSCSAG00000010713 I 0.000
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.000
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I 0.000
tbx15 Danio rerio ENSDARG00000002582 I 0.000
tbx20 Danio rerio ENSDARG00000005150 I 0.000
tbx18 Danio rerio ENSDARG00000036930 I 0.000
tbx22 Danio rerio ENSDARG00000091748 I 0.000
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I 0.000
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.000
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I 0.000
TBX18 Equus caballus ENSECAG00000005787 I 0.000
TBX22 Equus caballus ENSECAG00000014426 I 0.000
TBX20 Equus caballus ENSECAG00000018182 I 0.000
TBX15 Equus caballus ENSECAG00000023325 I 0.000
TBX15 Erinaceus europaeus ENSEEUG00000003919 I 0.000
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.000
TBX18 Erinaceus europaeus ENSEEUG00000013766 I 0.000
TBX18 Echinops telfairi ENSETEG00000006457 I 0.000
TBX22 Echinops telfairi ENSETEG00000006623 I 0.000
TBX20 Echinops telfairi ENSETEG00000012771 I 0.000
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.000
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I 0.000
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I 0.000
TBX22 Felis catus ENSFCAG00000002301 I 0.000
TBX18 Felis catus ENSFCAG00000012657 I 0.000
TBX20 Felis catus ENSFCAG00000013004 I 0.000
TBX15 Felis catus ENSFCAG00000023731 I 0.000
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I 0.000
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.000
TBX22 Gallus gallus ENSGALG00000004093 I 0.000
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.000
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I 0.000
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I 0.000
TBX22 Gorilla gorilla ENSGGOG00000008990 I 0.000
TBX15 Gorilla gorilla ENSGGOG00000013468 I 0.000
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.000
TBX18 Gorilla gorilla ENSGGOG00000027982 I 0.000
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I 0.000
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.000
ENSLACG00000006381 Latimeria chalumnae ENSLACG00000006381 I 0.000
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.000
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I 0.000
TBX22 Loxodonta africana ENSLAFG00000001881 I 0.000
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.000
TBX18 Loxodonta africana ENSLAFG00000015009 I 0.000
TBX15 Loxodonta africana ENSLAFG00000018452 I 0.000
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.000
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I 0.000
ENSLOCG00000014991 Lepisosteus oculatus ENSLOCG00000014991 I 0.000
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I 0.000
TBX22 Meleagris gallopavo ENSMGAG00000001700 I 0.000
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.000
TBX18 Meleagris gallopavo ENSMGAG00000013715 I 0.000
TBX15 Meleagris gallopavo ENSMGAG00000014235 I 0.000
TBX22 Microcebus murinus ENSMICG00000009019 I 0.000
TBX15 Myotis lucifugus ENSMLUG00000002958 I 0.000
TBX18 Myotis lucifugus ENSMLUG00000011326 I 0.000
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.000
TBX22 Myotis lucifugus ENSMLUG00000016826 I 0.000
TBX22 Macaca mulatta ENSMMUG00000009102 I 0.000
TBX15 Macaca mulatta ENSMMUG00000009257 I 0.000
TBX18 Macaca mulatta ENSMMUG00000010599 I 0.000
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.000
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.000
TBX22 Monodelphis domestica ENSMODG00000004255 I 0.000
TBX15 Monodelphis domestica ENSMODG00000005319 I 0.000
TBX18 Monodelphis domestica ENSMODG00000018361 I 0.000
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I 0.000
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I 0.000
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.000
ENSMPUG00000012619 Mustela putorius furo ENSMPUG00000012619 I 0.000
Tbx15 Mus musculus ENSMUSG00000027868 I 0.000
Tbx22 Mus musculus ENSMUSG00000031241 I 0.000
Tbx18 Mus musculus ENSMUSG00000032419 I 0.000
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.000
ENSNLEG00000002116 Nomascus leucogenys ENSNLEG00000002116 I 0.000
ENSNLEG00000005347 Nomascus leucogenys ENSNLEG00000005347 I 0.000
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I 0.000
TBX18 Ornithorhynchus anatinus ENSOANG00000000556 I 0.000
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.000
ENSOARG00000000455 Ovis aries ENSOARG00000000455 I 0.000
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.000
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I 0.000
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I 0.000
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I 0.000
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.000
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I 0.000
TBX22 Oryctolagus cuniculus ENSOCUG00000013685 I 0.000
TBX22 Otolemur garnettii ENSOGAG00000002759 I 0.000
TBX18 Otolemur garnettii ENSOGAG00000004300 I 0.000
TBX15 Otolemur garnettii ENSOGAG00000007282 I 0.000
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.000
ENSONIG00000001051 Oreochromis niloticus ENSONIG00000001051 I 0.000
ENSONIG00000003732 Oreochromis niloticus ENSONIG00000003732 I 0.000
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.000
ENSONIG00000015685 Oreochromis niloticus ENSONIG00000015685 I 0.000
ENSONIG00000017642 Oreochromis niloticus ENSONIG00000017642 I 0.000
TBX15 Ochotona princeps ENSOPRG00000004847 I 0.000
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.000
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I 0.000
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.000
ENSPANG00000025094 Papio anubis ENSPANG00000025094 I 0.000
ENSPANG00000025136 Papio anubis ENSPANG00000025136 I 0.000
TBX15 Procavia capensis ENSPCAG00000016333 I 0.000
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I 0.000
ENSPFOG00000003081 Poecilia formosa ENSPFOG00000003081 I 0.000
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.000
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I 0.000
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I 0.000
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I 0.000
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.000
ENSPPYG00000020504 Pongo abelii ENSPPYG00000020504 I 0.000
ENSPSIG00000005286 Pelodiscus sinensis ENSPSIG00000005286 I 0.000
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I 0.000
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.000
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I 0.000
TBX15 Pan troglodytes ENSPTRG00000001172 I 0.000
TBX18 Pan troglodytes ENSPTRG00000018390 I 0.000
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.000
TBX22 Pan troglodytes ENSPTRG00000022058 I 0.000
TBX22 Pteropus vampyrus ENSPVAG00000008832 I 0.000
TBX15 Pteropus vampyrus ENSPVAG00000015733 I 0.000
TBX18 Pteropus vampyrus ENSPVAG00000016771 I 0.000
Tbx22 Rattus norvegicus ENSRNOG00000002346 I 0.000
Tbx18 Rattus norvegicus ENSRNOG00000010685 I 0.000
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.000
Tbx15 Rattus norvegicus ENSRNOG00000019565 I 0.000
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I 0.000
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I 0.000
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I 0.000
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.000
TBX22 Sus scrofa ENSSSCG00000012449 I 0.000
TBX20 Sus scrofa ENSSSCG00000016662 I 0.000
ENSSTOG00000003725 Ictidomys tridecemlineatus ENSSTOG00000003725 I 0.000
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I 0.000
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I 0.000
TBX18 Tupaia belangeri ENSTBEG00000007925 I 0.000
TBX22 Tupaia belangeri ENSTBEG00000010144 I 0.000
TBX22 Taeniopygia guttata ENSTGUG00000002573 I 0.000
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.000
TBX18 Taeniopygia guttata ENSTGUG00000012504 I 0.000
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.000
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I 0.000
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I 0.000
tbx18 Takifugu rubripes ENSTRUG00000001419 I 0.000
tbx15 Takifugu rubripes ENSTRUG00000003945 I 0.000
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.000
TBX22 Takifugu rubripes ENSTRUG00000010801 I 0.000
ENSTSYG00000007267 Tarsius syrichta ENSTSYG00000007267 I 0.000
TBX18 Tursiops truncatus ENSTTRG00000005713 I 0.000
TBX15 Tursiops truncatus ENSTTRG00000011006 I 0.000
TBX22 Tursiops truncatus ENSTTRG00000014058 I 0.000
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.000
TBX18 Vicugna pacos ENSVPAG00000006869 I 0.000
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I 0.000
TBX22 Vicugna pacos ENSVPAG00000011942 I 0.000
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.000
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I 0.000
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I 0.000
GA19742 Drosophila pseudoobscura FBgn0079738 I 0.000
GF14390 Drosophila ananassae FBgn0091417 I 0.000
GF14392 Drosophila ananassae FBgn0091419 I 0.000
GG25073 Drosophila erecta FBgn0117202 I 0.000
GI17985 Drosophila mojavensis FBgn0140725 I 0.000
GI17986 Drosophila mojavensis FBgn0140726 I 0.000
GL25841 Drosophila persimilis FBgn0163425 I 0.000
GM18548 Drosophila sechellia FBgn0173455 I 0.000
GD23341 Drosophila simulans FBgn0194727 I 0.000
GJ19565 Drosophila virilis FBgn0206707 I 0.000
GJ19568 Drosophila virilis FBgn0206710 I 0.000
GK15084 Drosophila willistoni FBgn0217089 I 0.000
GK15086 Drosophila willistoni FBgn0217091 I 0.000
GE25417 Drosophila yakuba FBgn0242487 I 0.000
GA25466 Drosophila pseudoobscura FBgn0246844 I 0.000
HMEL012426 Heliconius melpomene HMEL012426 I 0.000
NEMVEDRAFT_v1g88753 Nematostella vectensis NEMVEDRAFT_v1g88753 I 0.000
SMAR008438 Strigamia maritima SMAR008438 I 0.000
Aan_R001146 Calypte anna Aan_R001146 I 0.000
Aan_R004737 Calypte anna Aan_R004737 I 0.000
Aan_R013329 Calypte anna Aan_R013329 I 0.000
Afo_R005490 Aptenodytes forsteri Afo_R005490 I 0.000
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I 0.000
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I 0.000
Brh_R004487 Buceros rhinoceros Brh_R004487 I 0.000
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I 0.000
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.000
Cmyd_10007257 Chelonia mydas Cmyd_10007257 I 0.000
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I 0.000
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I 0.000
ENSP00000358437 Macaca fascicularis ENSP00000358437 I 0.000
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I 0.000
ENSP00000358677 Macaca fascicularis ENSP00000358677 I 0.000
ENSP00000362390-D1 Bos grunniens ENSP00000362390-D1 I 0.000
ENSP00000362390 Macaca fascicularis ENSP00000362390 I 0.000
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.000
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.000
Gfo_R005492 Geospiza fortis Gfo_R005492 I 0.000
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I 0.000
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I 0.000
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.000
Myotis_brandtii_Tbx22_10010932 Myotis brandtii Myotis_brandtii_Tbx22_10010932 I 0.000
Ogr00863 Ophisaurus gracilis Ogr00863 I 0.000
Ogr03354 Ophisaurus gracilis Ogr03354 I 0.000
Ogr10944 Ophisaurus gracilis Ogr10944 I 0.000
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.000
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.000
Pvit_04496 Pogona vitticeps Pvit_04496 I 0.000
Pvit_09354 Pogona vitticeps Pvit_09354 I 0.000
Pvit_12384 Pogona vitticeps Pvit_12384 I 0.000
Tal_R000620 Tyto alba Tal_R000620 I 0.000
e_gw.418.20.1 Branchiostoma floridae e_gw.418.20.1 I 0.000
estExt_fgenesh2_pg.C_1050030 Branchiostoma floridae estExt_fgenesh2_pg.C_1050030 I 0.000
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.000
LCUP000433 Lucilia cuprina LCUP000433 I 0.000
SNAPOd2T00017929001 Oikopleura dioica SNAPOd2T00017929001 I 0.000
tbx15 Xenopus tropicalis XB-GENE-483924 I 0.000
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.000
tbx18 Xenopus tropicalis XB-GENE-489907 I 0.000
tbx20.L Xenopus laevis XB-GENE-865696 I 0.000
tbx22 Xenopus tropicalis XB-GENE-994522 I 0.000
ASTEI05186 Anopheles stephensi ASTEI05186 I 0.000
MDOA009961 Musca domestica MDOA009961 I 0.000
MDOA010319 Musca domestica MDOA010319 I 0.000
TASK_0000456901 Taenia asiatica TASK_0000456901 I 0.000
TMUE_s0080002600 Trichuris muris TMUE_s0080002600 I 0.000
TTRE_0000323501 Trichuris trichiura TTRE_0000323501 I 0.000