DAPPUDRAFT_59354 (Daphnia pulex)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 DAPPUDRAFT_59354 T339567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.826 0.769
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.826 0.769
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.826 0.769
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.826 0.769
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.826 0.769
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.826 0.769
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.826 0.769
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.826 0.769
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.826 0.769
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.826 0.769
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.826 0.769
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.826 0.769
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.826 0.769
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.826 0.769
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.826 0.769
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.826 0.769
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.826 0.769
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.816 0.802
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.747 0.604
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.747 0.604
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.747 0.604
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX72115 T-box 59 247

Links

Other T-box family TFs
Other Daphnia pulex TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DAPPUDRAFT_59366 Daphnia pulex DAPPUDRAFT_59366 I 0.879
HMEL012426 Heliconius melpomene HMEL012426 I 0.865
AGAP008563 Anopheles gambiae AGAP008563 I 0.864
ASTEI05186 Anopheles stephensi ASTEI05186 I 0.864
SMAR008438 Strigamia maritima SMAR008438 I 0.855
ADAC004417 Anopheles darlingi ADAC004417 I 0.852
AGAP008567 Anopheles gambiae AGAP008567 I 0.852
AALB000416 Anopheles albimanus AALB000416 I 0.852
AARA011014 Anopheles arabiensis AARA011014 I 0.852
AATE013317 Anopheles atroparvus AATE013317 I 0.852
ACOM023916 Anopheles coluzzii ACOM023916 I 0.852
ACUA008697 Anopheles culicifacies ACUA008697 I 0.852
ADIR010890 Anopheles dirus ADIR010890 I 0.852
AEPI001842 Anopheles epiroticus AEPI001842 I 0.852
AFAF008895 Anopheles farauti AFAF008895 I 0.852
AFUN010568 Anopheles funestus AFUN010568 I 0.852
AMAM010638 Anopheles maculatus AMAM010638 I 0.852
AMEC012505 Anopheles melas AMEC012505 I 0.852
AMEC014683 Anopheles melas AMEC014683 I 0.852
AMEM005379 Anopheles merus AMEM005379 I 0.852
AMIN000992 Anopheles minimus AMIN000992 I 0.852
AQUA000256 Anopheles quadriannulatus AQUA000256 I 0.852
ASTEI05184 Anopheles stephensi ASTEI05184 I 0.852
GB45715 Apis mellifera GB45715 I 0.845
AGAP008569 Anopheles gambiae AGAP008569 I 0.843
MDOA009961 Musca domestica MDOA009961 I 0.841
AAEL008337 Aedes aegypti AAEL008337 I 0.840
NV17864 Nasonia vitripennis NV17864 I 0.839
tetur32g01390 Tetranychus urticae tetur32g01390 I 0.836
tetur32g01430 Tetranychus urticae tetur32g01430 I 0.836
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.835
ACYPI008613 Acyrthosiphon pisum ACYPI008613 I 0.834
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.834
L798_07505 Zootermopsis nevadensis L798_07505 I 0.832
SMAR015389 Strigamia maritima SMAR015389 I 0.832
GK15084 Drosophila willistoni FBgn0217089 I 0.830
H15 Drosophila melanogaster FBgn0016660 I 0.829
GF14390 Drosophila ananassae FBgn0091417 I 0.829
GG25071 Drosophila erecta FBgn0117200 I 0.829
GI17985 Drosophila mojavensis FBgn0140725 I 0.829
GM18547 Drosophila sechellia FBgn0173454 I 0.829
GD23340 Drosophila simulans FBgn0194726 I 0.829
GJ19565 Drosophila virilis FBgn0206707 I 0.829
GE25406 Drosophila yakuba FBgn0242479 I 0.829
TBX20 Bos taurus ENSBTAG00000017541 I 0.828
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.828
TBX20 Sus scrofa ENSSSCG00000016662 I 0.828
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.828
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.827
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.827
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.826
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.826
TBX20 Canis familiaris ENSCAFG00000028536 I 0.826
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.826
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.826
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.826
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.826
TBX20 Equus caballus ENSECAG00000018182 I 0.826
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.826
TBX20 Echinops telfairi ENSETEG00000012771 I 0.826
TBX20 Felis catus ENSFCAG00000013004 I 0.826
TBX20 Homo sapiens ENSG00000164532 D 0.826
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.826
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.826
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.826
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.826
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.826
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.826
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.826
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.826
Tbx20 Mus musculus ENSMUSG00000031965 D 0.826
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.826
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.826
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.826
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.826
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.826
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.826
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.826
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.826
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.826
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.826
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.826
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.826
GL25841 Drosophila persimilis FBgn0163425 I 0.826
GA25466 Drosophila pseudoobscura FBgn0246844 I 0.826
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.826
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.826
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.826
NV17866 Nasonia vitripennis NV17866 I 0.825
csin100383 Clonorchis sinensis csin100383 I 0.824
T265_12717 Opisthorchis viverrini T265_12717 I 0.824
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.820
tbx20 Danio rerio ENSDARG00000005150 I 0.818
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.818
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.818
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.818
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.818
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.818
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.818
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.818
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.818
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.818
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.818
tbx20.L Xenopus laevis XB-GENE-865696 I 0.818
GA19742 Drosophila pseudoobscura FBgn0079738 I 0.816
GF14392 Drosophila ananassae FBgn0091419 I 0.816
GG25073 Drosophila erecta FBgn0117202 I 0.816
GM18548 Drosophila sechellia FBgn0173455 I 0.816
GD23341 Drosophila simulans FBgn0194727 I 0.816
GJ19568 Drosophila virilis FBgn0206710 I 0.816
GK15086 Drosophila willistoni FBgn0217091 I 0.816
GE25417 Drosophila yakuba FBgn0242487 I 0.816
mid Drosophila melanogaster FBgn0261963 D 0.816
LCUP000433 Lucilia cuprina LCUP000433 I 0.816
MDOA010319 Musca domestica MDOA010319 I 0.816
MCOS_0000012101 Mesocestoides corti MCOS_0000012101 I 0.816
D915_09218 Fasciola hepatica D915_09218 I 0.814
TC014296 Tribolium castaneum TC014296 I 0.813
EmuJ_000377200 Echinococcus multilocularis EmuJ_000377200 I 0.813
HDID_0000627201 Hymenolepis diminuta HDID_0000627201 I 0.813
HmN_000695600 Hymenolepis microstoma HmN_000695600 I 0.813
HNAJ_0000047101 Hymenolepis nana HNAJ_0000047101 I 0.813
Sjc_0040480 Schistosoma japonicum Sjc_0040480 I 0.810
HelroG98030 Helobdella robusta HelroG98030 I 0.808
Smp_003900 Schistosoma mansoni Smp_003900 I 0.808
GI17986 Drosophila mojavensis FBgn0140726 I 0.807
ECANG7_07504 Echinococcus canadensis ECANG7_07504 I 0.805
tbx20 Ciona intestinalis ENSCING00000005267 I 0.796
HelroG134299 Helobdella robusta HelroG134299 I 0.796
Ocbimv22004458m.g Octopus bimaculoides Ocbimv22004458m.g I 0.794
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.793
e_gw.90.81.1 Branchiostoma floridae e_gw.90.81.1 I 0.787
TASK_0000456901 Taenia asiatica TASK_0000456901 I 0.786
SMU15033270 Schmidtea mediterranea SMU15033270 I 0.775
NEMVEDRAFT_v1g117456 Nematostella vectensis NEMVEDRAFT_v1g117456 I 0.769
HCOI01255700 Haemonchus contortus HCOI01255700 I 0.760
LotgiG129083 Lottia gigantea LotgiG129083 I 0.755
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I 0.754
CBG07058 Caenorhabditis briggsae CBG07058 I 0.753
CBG24273 Caenorhabditis briggsae CBG24273 I 0.753
CBN11476 Caenorhabditis brenneri CBN11476 I 0.753
CRE18119 Caenorhabditis remanei CRE18119 I 0.753
mab-9 Caenorhabditis elegans WBGene00003106 I 0.753
L898_g31228 Steinernema monticolum L898_g31228 N 0.753
CJA32610 Caenorhabditis japonica CJA32610 I 0.752
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I 0.752
TBX18 Anolis carolinensis ENSACAG00000003859 I 0.747
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I 0.747
TBX18 Bos taurus ENSBTAG00000018161 I 0.747
TBX18 Canis familiaris ENSCAFG00000002987 I 0.747
TBX18 Callithrix jacchus ENSCJAG00000015218 I 0.747
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I 0.747
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I 0.747
TBX18 Equus caballus ENSECAG00000005787 I 0.747
TBX18 Erinaceus europaeus ENSEEUG00000013766 I 0.747
TBX18 Echinops telfairi ENSETEG00000006457 I 0.747
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I 0.747
TBX18 Felis catus ENSFCAG00000012657 I 0.747
TBX18 Homo sapiens ENSG00000112837 D 0.747
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I 0.747
TBX18 Gorilla gorilla ENSGGOG00000027982 I 0.747
TBX18 Loxodonta africana ENSLAFG00000015009 I 0.747
TBX18 Myotis lucifugus ENSMLUG00000011326 I 0.747
TBX18 Macaca mulatta ENSMMUG00000010599 I 0.747
TBX18 Monodelphis domestica ENSMODG00000018361 I 0.747
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I 0.747
Tbx18 Mus musculus ENSMUSG00000032419 I 0.747
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I 0.747
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I 0.747
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I 0.747
TBX18 Otolemur garnettii ENSOGAG00000004300 I 0.747
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I 0.747
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I 0.747
TBX18 Pan troglodytes ENSPTRG00000018390 I 0.747
TBX18 Pteropus vampyrus ENSPVAG00000016771 I 0.747
Tbx18 Rattus norvegicus ENSRNOG00000010685 I 0.747
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I 0.747
TBX18 Sus scrofa ENSSSCG00000004290 I 0.747
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I 0.747
TBX18 Tupaia belangeri ENSTBEG00000007925 I 0.747
TBX18 Taeniopygia guttata ENSTGUG00000012504 I 0.747
TBX18 Tursiops truncatus ENSTTRG00000005713 I 0.747
TBX18 Vicugna pacos ENSVPAG00000006869 I 0.747
Aan_R001146 Calypte anna Aan_R001146 I 0.747
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I 0.747
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I 0.747
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I 0.747
ENSP00000358677 Macaca fascicularis ENSP00000358677 I 0.747
Gfo_R005492 Geospiza fortis Gfo_R005492 I 0.747
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I 0.747
Ogr10944 Ophisaurus gracilis Ogr10944 I 0.747
Pvit_09354 Pogona vitticeps Pvit_09354 I 0.747
tbx18 Xenopus tropicalis XB-GENE-489907 I 0.747
L889_g25747 Steinernema feltiae L889_g25747 N 0.746
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I 0.745
PTRK_0000394000 Parastrongyloides trichosuri PTRK_0000394000 N 0.745
SPAL_0000556200 Strongyloides papillosus SPAL_0000556200 N 0.745
SSTP_0001033100 Strongyloides stercoralis SSTP_0001033100 N 0.745
NEMVEDRAFT_v1g106123 Nematostella vectensis NEMVEDRAFT_v1g106123 I 0.744
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I 0.743
ASU_05625 Ascaris suum ASU_05625 I 0.739
Bm6032 Brugia malayi Bm6032 N 0.738
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I 0.738
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I 0.738
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I 0.738
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I 0.738
tbx18 Takifugu rubripes ENSTRUG00000001419 I 0.738
WBGene00247213 Onchocerca volvulus WBGene00247213 I 0.738
L596_g12623 Steinernema carpocapsae L596_g12623 I 0.738
L892_g16474 Steinernema scapterisci L892_g16474 I 0.738
nAv.1.0.1.g03795 Acanthocheilonema viteae nAv.1.0.1.g03795 N 0.738
TMUE_s0080002600 Trichuris muris TMUE_s0080002600 I 0.736
TTRE_0000323501 Trichuris trichiura TTRE_0000323501 I 0.736