ASU_05625 (Ascaris suum)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 ASU_05625 T341610_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.736 0.687
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.736 0.687
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.736 0.687
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.736 0.687
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.736 0.687
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.736 0.687
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.736 0.687
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.736 0.687
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.736 0.687
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.736 0.687
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.736 0.687
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.736 0.687
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.736 0.687
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.736 0.687
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.736 0.681
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.736 0.681
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.736 0.681
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_05625 T-box 105 295

Links

Other T-box family TFs
Other Ascaris suum TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WBGene00247213 Onchocerca volvulus WBGene00247213 I 0.903
nAv.1.0.1.g03795 Acanthocheilonema viteae nAv.1.0.1.g03795 N 0.888
Bm6032 Brugia malayi Bm6032 N 0.880
L596_g12623 Steinernema carpocapsae L596_g12623 I 0.877
L892_g16474 Steinernema scapterisci L892_g16474 I 0.877
HCOI01255700 Haemonchus contortus HCOI01255700 I 0.866
CJA32610 Caenorhabditis japonica CJA32610 I 0.864
L898_g31228 Steinernema monticolum L898_g31228 N 0.862
L889_g25747 Steinernema feltiae L889_g25747 N 0.855
CBG07058 Caenorhabditis briggsae CBG07058 I 0.850
CBG24273 Caenorhabditis briggsae CBG24273 I 0.850
CBN11476 Caenorhabditis brenneri CBN11476 I 0.850
CRE18119 Caenorhabditis remanei CRE18119 I 0.850
mab-9 Caenorhabditis elegans WBGene00003106 I 0.850
PTRK_0000394000 Parastrongyloides trichosuri PTRK_0000394000 N 0.833
SPAL_0000556200 Strongyloides papillosus SPAL_0000556200 N 0.833
SSTP_0001033100 Strongyloides stercoralis SSTP_0001033100 N 0.833
RSKR_0000207000 Rhabditophanes kr3021 RSKR_0000207000 N 0.804
DAPPUDRAFT_59366 Daphnia pulex DAPPUDRAFT_59366 I 0.752
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.748
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.743
HDID_0000627201 Hymenolepis diminuta HDID_0000627201 I 0.740
DAPPUDRAFT_59354 Daphnia pulex DAPPUDRAFT_59354 I 0.739
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.739
TBX20 Canis familiaris ENSCAFG00000028536 I 0.739
tbx20 Danio rerio ENSDARG00000005150 I 0.739
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.739
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.739
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.739
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.739
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.739
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.739
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.739
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.739
tbx20.L Xenopus laevis XB-GENE-865696 I 0.739
TBX20 Bos taurus ENSBTAG00000017541 I 0.737
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.737
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.737
TBX20 Sus scrofa ENSSSCG00000016662 I 0.737
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.737
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.737
HmN_000695600 Hymenolepis microstoma HmN_000695600 I 0.737
HNAJ_0000047101 Hymenolepis nana HNAJ_0000047101 I 0.737
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.736
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.736
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.736
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.736
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.736
TBX20 Equus caballus ENSECAG00000018182 I 0.736
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.736
TBX20 Echinops telfairi ENSETEG00000012771 I 0.736
TBX20 Felis catus ENSFCAG00000013004 I 0.736
TBX20 Homo sapiens ENSG00000164532 D 0.736
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.736
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.736
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.736
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.736
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.736
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.736
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.736
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.736
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.736
Tbx20 Mus musculus ENSMUSG00000031965 D 0.736
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.736
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.736
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.736
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.736
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.736
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.736
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.736
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.736
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.736
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.736
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.736
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.736
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.736
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.736
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.736
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.736