CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K01058
(
Eucalyptus grandis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Eucgr.K01058
T228507_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.668
0.737
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K01058.1
Homeodomain
54
110
KSKRKMKTASQLEILEKTYAVEPYPSEAIRTELSGQLGLSDRQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Eucalyptus grandis
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
0.000
PHACADRAFT_258404
Phanerochaete carnosa
PHACADRAFT_258404
I
0.000
PHLGIDRAFT_76307
Phlebiopsis gigantea
PHLGIDRAFT_76307
I
0.000
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
0.000
PILCRDRAFT_94123
Piloderma croceum
PILCRDRAFT_94123
I
0.000
PLEOSDRAFT_1083727
Pleurotus ostreatus
PLEOSDRAFT_1083727
I
0.000
POSPLDRAFT_113058
Postia placenta
POSPLDRAFT_113058
I
0.000
PSEUBRA_SCAF2g02944
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02944
I
0.000
PTTG_02951
Puccinia triticina
PTTG_02951
I
0.000
SCHCODRAFT_257622
Schizophyllum commune
SCHCODRAFT_257622
I
0.000
PFL1_03021
Pseudozyma flocculosa
PFL1_03021
I
0.000
sr10662
Sporisorium reilianum
sr10662
I
0.000
UM01925
Ustilago maydis
UM01925
I
0.000
V565_004710
Rhizoctonia solani
V565_004710
I
0.000
estExt_fgeneshMC_kg.C_60018
Mucor circinelloides
estExt_fgeneshMC_kg.C_60018
I
0.000
fgeneshMC_pm.9_#_186
Mucor circinelloides
fgeneshMC_pm.9_#_186
I
0.000
fgeneshPB_pg.22__185
Phycomyces blakesleeanus
fgeneshPB_pg.22__185
I
0.000
fgeneshPB_pg.2__402
Phycomyces blakesleeanus
fgeneshPB_pg.2__402
I
0.000
gw1.3.368.1
Heterobasidion annosum
gw1.3.368.1
I
0.000
GLOINDRAFT_38994
Rhizophagus irregularis
GLOINDRAFT_38994
I
0.000
AMAG_11531
Allomyces macrogynus
AMAG_11531
I
0.000
RO3G_08081
Rhizopus oryzae
RO3G_08081
I
0.000
SPPG_09179
Spizellomyces punctatus
SPPG_09179
I
0.000
AGABI2DRAFT_221018
Agaricus bisporus
AGABI2DRAFT_221018
I
0.000
BN946_scf184656.g9
Trametes cinnabarina
BN946_scf184656.g9
I
0.000
CC1G_03210
Coprinopsis cinerea
CC1G_03210
I
0.000
CERSUDRAFT_154783
Ceriporiopsis subvermispora
CERSUDRAFT_154783
I
0.000
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
0.000
GALMADRAFT_535775
Galerina marginata
GALMADRAFT_535775
I
0.000
AMAG_10934
Allomyces macrogynus
AMAG_10934
I
0.000
HETIRDRAFT_245864
Heterobasidion irregulare
HETIRDRAFT_245864
I
0.000
K443DRAFT_671242
Laccaria amethystina
K443DRAFT_671242
I
0.000
LACBIDRAFT_399488
Laccaria bicolor
LACBIDRAFT_399488
I
0.000
M378DRAFT_10526
Amanita muscaria
M378DRAFT_10526
I
0.000
M413DRAFT_24478
Hebeloma cylindrosporum
M413DRAFT_24478
I
0.000
MELLADRAFT_118331
Melampsora laricipopulina
MELLADRAFT_118331
I
0.000
PaG_02922
Pseudozyma aphidis
PaG_02922
I
0.000
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
0.000