Gorai.012G148900 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.012G148900 T228810_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19166.1
M01249_2.00 		Cannabis sativa
CCMCTAWY
RWTAGKGG		 PBM
Lambert et al.(2019)
pTH11273 		0.692 0.765
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G148900.1 Homeodomain 874 924
Gorai.012G148900.2 Homeodomain 874 924

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HIC1 Homo sapiens ENSG00000177374 D
ENSNLEG00000000203 Nomascus leucogenys ENSNLEG00000000203 I
HIC2 Monodelphis domestica ENSMODG00000017662 I
ENSONIG00000021060 Oreochromis niloticus ENSONIG00000021060 I
ENSPANG00000024595 Papio anubis ENSPANG00000024595 I
HIC1 Procavia capensis ENSPCAG00000000535 I
ENSPFOG00000004471 Poecilia formosa ENSPFOG00000004471 I
ENSPPYG00000007789 Pongo abelii ENSPPYG00000007789 I
ENSPTRG00000008543 Pan troglodytes ENSPTRG00000008543 I
HIC1 Pteropus vampyrus ENSPVAG00000002158 I
Hic1 Rattus norvegicus ENSRNOG00000046405 I
LOC100912068 Rattus norvegicus ENSRNOG00000057619 I
HIC1 Sorex araneus ENSSARG00000010162 I
HIC1 Sus scrofa ENSSSCG00000025717 I
ENSSTOG00000011792 Ictidomys tridecemlineatus ENSSTOG00000011792 I
ENSXMAG00000001419 Xiphophorus maculatus ENSXMAG00000001419 I
Myotis_brandtii_HIC1_10015709 Myotis brandtii Myotis_brandtii_HIC1_10015709 I
ENSMPUG00000019502 Mustela putorius furo ENSMPUG00000019502 I
ENSAMEG00000007657 Ailuropoda melanoleuca ENSAMEG00000007657 I
ENSMMUG00000030393 Macaca mulatta ENSMMUG00000030393 I
HIC1 Myotis lucifugus ENSMLUG00000010527 I
HIC1 Microcebus murinus ENSMICG00000012908 I
ENSLOCG00000006478 Lepisosteus oculatus ENSLOCG00000006478 I
HIC1 Loxodonta africana ENSLAFG00000001259 I
ENSGMOG00000011705 Gadus morhua ENSGMOG00000011705 I
HIC1 Gorilla gorilla ENSGGOG00000027584 I
ENSDORG00000016613 Dipodomys ordii ENSDORG00000016613 I
HIC1 Dasypus novemcinctus ENSDNOG00000049226 I
hic1 Danio rerio ENSDARG00000055493 I
ENSCSAG00000013805 Chlorocebus sabaeus ENSCSAG00000013805 I
HIC1 Canis familiaris ENSCAFG00000019257 I
HIC1 Bos taurus ENSBTAG00000025130 I
ENSAMXG00000024869 Astyanax mexicanus ENSAMXG00000024869 I