ACUA016236 (Anopheles culicifacies)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACUA016236 T231496_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g136480
M02147_2.00
Nematostella vectensis
NNNNNNNNNN

NNNNNNNNNN
PBM
Weirauch et al.(2014)
pTH6103
0.716 0.579
Rax
M00426_2.00
Mus musculus
NNTAATTRN

NYAATTANN
PBM
Berger et al.(2008)
Rax_3443
0.607 0.684
RAX
M03149_2.00
Homo sapiens
NHTAATTRNN

NNYAATTADN
SELEX
Jolma et al.(2013)
RAX_1
0.607 0.684
Rx
M03840_2.00
Drosophila melanogaster
BTAATTRV

BYAATTAV
SELEX
Nitta et al.(2015)
Rx_1
0.607 0.684
Rx
M03841_2.00
Drosophila melanogaster
NTAATBNSATTAN

NTAATSNVATTAN
SELEX
Nitta et al.(2015)
Rx_2
0.607 0.684
RAX
M05142_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX
0.607 0.684
Rx
M06520_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0202.1
0.607 0.684
Rx
M06317_2.00
Drosophila melanogaster
VYTAATTR

YAATTARB
B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617
0.607 0.684
Rx
M06318_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617
0.607 0.684
Rax
M10773_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RAX_04
0.607 0.684
RAX
M05143_2.00
Homo sapiens
NTAAYRNN

NNYRTTAN
SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1
0.607 0.684
RAX
M05144_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2
0.607 0.684
Alx3
M00402_2.00
Mus musculus
WAATNDN

NHNATTW
PBM
Berger et al.(2008)
Alx3_3418
0.605 0.754
ALX3
M03172_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_1
0.605 0.754
ALX3
M03173_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_2
0.605 0.754
ALX3
M03174_2.00
Homo sapiens
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ALX3_3
0.605 0.754
ALX3
M05195_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX
0.605 0.754
ALX3
M05198_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX
0.605 0.754
ALX3
M05196_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1
0.605 0.754
ALX3
M05197_2.00
Homo sapiens
NTAAYBHN

NDVRTTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2
0.605 0.754
ALX3
M05199_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1
0.605 0.754
ALX3
M05200_2.00
Homo sapiens
NTAAYGHN

NDCRTTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2
0.605 0.754
Alx4
M00487_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Alx4_1744
0.605 0.737
ALX4
M03079_2.00
Homo sapiens
NTAATYNRRTTAN

NTAAYYNRATTAN
SELEX
Jolma et al.(2013)
ALX4_1
0.605 0.737
Alx4
M03278_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx4_1
0.605 0.737
ALX4
M04917_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX
0.605 0.737
ALX4
M10637_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ALX4_01
0.605 0.737
ALX4
M04918_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1
0.605 0.737
ALX4
M04919_2.00
Homo sapiens
NTWAYGHN

NDCRTWAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2
0.605 0.737
RAX2
M03214_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
RAXL1_1
0.603 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA016236-PA Homeodomain 124 180

Links

Other Homeodomain family TFs
Other Anopheles culicifacies TFs

476 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_014_00175 Aquilegia coerulea Aquca_014_00175 N 0.000
LjT26J05.10.nc Lotus japonicus LjT26J05.10.nc N 0.000
LjT15C06.70.nc Lotus japonicus LjT15C06.70.nc N 0.000
SapurV1A.0105s0110 Salix purpurea SapurV1A.0105s0110 N 0.000
orange1.1g011012m.g Citrus sinensis orange1.1g011012m.g N 0.000
MDP0000884524 Malus domestica MDP0000884524 N 0.000
MDP0000319342 Malus domestica MDP0000319342 N 0.000
Lus10028056.g Linum usitatissimum Lus10028056.g N 0.000
Lus10008316.g Linum usitatissimum Lus10008316.g N 0.000
Gorai.010G048800 Gossypium raimondii Gorai.010G048800 N 0.000
Gorai.009G244200 Gossypium raimondii Gorai.009G244200 N 0.000
gene11137-v1.0-hybrid Fragaria vesca gene11137-v1.0-hybrid N 0.000
evm.TU.supercontig_36.32 Carica papaya evm.TU.supercontig_36.32 N 0.000
Eucgr.L03490 Eucalyptus grandis Eucgr.L03490 N 0.000
Ciclev10000940m.g Citrus clementina Ciclev10000940m.g N 0.000
GLYMA04G43090 Glycine max GLYMA04G43090 N 0.000
cassava44367.m1 Manihot esculenta cassava44367.m1 N 0.000
cassava32027.m1 Manihot esculenta cassava32027.m1 N 0.000
29908.m006159 Ricinus communis 29908.m006159 N 0.000
Pm004863 Prunus mume Pm004863 N 0.000
Ca_26279 Cicer arietinum Ca_26279 N 0.000
VIT_18s0001g03310 Vitis vinifera VIT_18s0001g03310 N 0.000
TCM_035069 Theobroma cacao TCM_035069 N 0.000
Solyc11g013150.1 Solanum lycopersicum Solyc11g013150.1 N 0.000
PRUPE_ppa018977mg Prunus persica PRUPE_ppa018977mg N 0.000
POPTR_0005s15900 Populus trichocarpa POPTR_0005s15900 N 0.000
POPTR_0002s08660 Populus trichocarpa POPTR_0002s08660 N 0.000
PGSC0003DMG400012071 Solanum tuberosum PGSC0003DMG400012071 N 0.000
MTR_3g072710 Medicago truncatula MTR_3g072710 N 0.000
GLYMA06G11610 Glycine max GLYMA06G11610 N 0.000