CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0105s0110
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0105s0110
T203125_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0105s0110.1.p
GRAS
114
500
LVHLLMAAAEALTGLNKNRDLARVILVRLKELVSPNDGTNMERLAAHFTDALQGLLEGSGSIRGHKHLSVINNGPYHHHHRDDPPHHQSDVLAAFQLLQDMSPYVKFGHFTANQAILEAVADDRRIHIVDYDIMEGIQWSSLMQALVTRKDGPPAPHLRITALSRGGNGRRSIGTVQETGRRLLAFAASIGQPFSFHQCRLDSDETFRPSALKLVRGEALVMNCMLQLPHFSYRAPGSVTSFISGAKTLNPRLIAMVEEEVGTVGDGGFVSRFMDSLHHYSAFYDSLEAGFPMQGRARALVERVFLGPRIAGSLARIYRARGEEGCPWEEWLAVVGFQPVKISFANHCQAKLLLGLFNDGYRVEELASNRLVLGWKSRRLLSASIWT
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s15900
Populus trichocarpa
POPTR_0005s15900
N
0.902
POPTR_0002s08660
Populus trichocarpa
POPTR_0002s08660
N
0.872
cassava44367.m1
Manihot esculenta
cassava44367.m1
N
0.869
SapurV1A.0010s0900
Salix purpurea
SapurV1A.0010s0900
N
0.855
TCM_035069
Theobroma cacao
TCM_035069
N
0.853
gene11137-v1.0-hybrid
Fragaria vesca
gene11137-v1.0-hybrid
N
0.837
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.834
Pm004863
Prunus mume
Pm004863
N
0.831
VIT_18s0001g03310
Vitis vinifera
VIT_18s0001g03310
N
0.828
29908.m006159
Ricinus communis
29908.m006159
N
0.828
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.826
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.826
PRUPE_ppa018977mg
Prunus persica
PRUPE_ppa018977mg
N
0.823
Eucgr.L03490
Eucalyptus grandis
Eucgr.L03490
N
0.817
cassava32027.m1
Manihot esculenta
cassava32027.m1
N
0.807
MDP0000319342
Malus domestica
MDP0000319342
N
0.807
evm.TU.supercontig_36.32
Carica papaya
evm.TU.supercontig_36.32
N
0.790
Gorai.009G244200
Gossypium raimondii
Gorai.009G244200
N
0.785
Lus10008316.g
Linum usitatissimum
Lus10008316.g
N
0.785
MDP0000884524
Malus domestica
MDP0000884524
N
0.785
GLYMA06G11610
Glycine max
GLYMA06G11610
N
0.781
PGSC0003DMG400012071
Solanum tuberosum
PGSC0003DMG400012071
N
0.774
Aquca_014_00175
Aquilegia coerulea
Aquca_014_00175
N
0.773
GLYMA04G43090
Glycine max
GLYMA04G43090
N
0.771
MTR_3g072710
Medicago truncatula
MTR_3g072710
N
0.760
Solyc11g013150.1
Solanum lycopersicum
Solyc11g013150.1
N
0.758
Ca_26279
Cicer arietinum
Ca_26279
N
0.757
Lus10028056.g
Linum usitatissimum
Lus10028056.g
N
0.755
LjT26J05.10.nc
Lotus japonicus
LjT26J05.10.nc
N
0.753
LjT15C06.70.nc
Lotus japonicus
LjT15C06.70.nc
N
0.716
Traes_4DL_5B3B57371
Triticum aestivum
Traes_4DL_5B3B57371
N
0.711