D917_09337 (Trichinella nativa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 D917_09337 T233517_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.746 0.289
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.746 0.289
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.746 0.289
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.739 0.356
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.739 0.356
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.739 0.356
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.739 0.356
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.739 0.356
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.739 0.356
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.739 0.356
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.739 0.356
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.739 0.356
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D917_09337 Homeodomain 7 51

Links

Other Homeodomain family TFs
Other Trichinella nativa TFs

1217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
daf-12 Caenorhabditis elegans WBGene00000908 D 0.000
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I 0.000
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.000
WUBG_13334 Wuchereria bancrofti WUBG_13334 I 0.000
HR96 Aedes aegypti AAEL007202 I 0.000
ACEP16468 Atta cephalotes ACEP16468 I 0.000
ADAC003041 Anopheles darlingi ADAC003041 I 0.000
AGAP004224 Anopheles gambiae AGAP004224 I 0.000
BGIBMGA010782 Bombyx mori BGIBMGA010782 I 0.000
Bm3787 Brugia malayi Bm3787 I 0.000
CapteG119973 Capitella teleta CapteG119973 I 0.000
CapteG121837 Capitella teleta CapteG121837 I 0.000
CapteG177005 Capitella teleta CapteG177005 I 0.000
CapteG224377 Capitella teleta CapteG224377 I 0.000
CBG04512 Caenorhabditis briggsae CBG04512 I 0.000
CBG05944 Caenorhabditis briggsae CBG05944 I 0.000
CBG07759 Caenorhabditis briggsae CBG07759 I 0.000
CBN06351 Caenorhabditis brenneri CBN06351 I 0.000
CBN08904 Caenorhabditis brenneri CBN08904 I 0.000
CBN26095 Caenorhabditis brenneri CBN26095 I 0.000
CBN31767 Caenorhabditis brenneri CBN31767 I 0.000
CGI_10007907 Crassostrea gigas CGI_10007907 I 0.000
CGI_10020896 Crassostrea gigas CGI_10020896 I 0.000
CGI_10027031 Crassostrea gigas CGI_10027031 I 0.000
CJA03214 Caenorhabditis japonica CJA03214 I 0.000
CJA11532 Caenorhabditis japonica CJA11532 I 0.000
CPIJ016038 Culex quinquefasciatus CPIJ016038 I 0.000
CRE05362 Caenorhabditis remanei CRE05362 I 0.000
CRE07237 Caenorhabditis remanei CRE07237 I 0.000
CRE12534 Caenorhabditis remanei CRE12534 I 0.000
CRE19106 Caenorhabditis remanei CRE19106 I 0.000
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.000
vdr-a Ciona intestinalis ENSCING00000020740 I 0.000
Hr96 Drosophila grimshawi FBgn0020174 I 0.000
GA11197 Drosophila pseudoobscura FBgn0071252 I 0.000
GF16320 Drosophila ananassae FBgn0093341 I 0.000
GG11347 Drosophila erecta FBgn0103647 I 0.000
GI22223 Drosophila mojavensis FBgn0144951 I 0.000
GM17786 Drosophila sechellia FBgn0172693 I 0.000
GD21158 Drosophila simulans FBgn0192609 I 0.000
GJ24344 Drosophila virilis FBgn0211424 I 0.000
GK14276 Drosophila willistoni FBgn0216282 I 0.000
GE23543 Drosophila yakuba FBgn0240719 I 0.000
GB52904 Apis mellifera GB52904 I 0.000
HelroG137551 Helobdella robusta HelroG137551 I 0.000
HelroG137640 Helobdella robusta HelroG137640 I 0.000
HelroG99849 Helobdella robusta HelroG99849 I 0.000
HMEL016865 Heliconius melpomene HMEL016865 I 0.000
ISCW009328 Ixodes scapularis ISCW009328 I 0.000
KGM_05575 Danaus plexippus KGM_05575 I 0.000
L798_15710 Zootermopsis nevadensis L798_15710 I 0.000
LOAG_10538 Loa loa LOAG_10538 I 0.000
LotgiG100616 Lottia gigantea LotgiG100616 I 0.000
LotgiG59139 Lottia gigantea LotgiG59139 I 0.000
MCINX005291 Melitaea cinxia MCINX005291 I 0.000
NV10187 Nasonia vitripennis NV10187 I 0.000
PHUM460970 Pediculus humanus PHUM460970 I 0.000
Ppa-nhr-8 Pristionchus pacificus PPA17111 I 0.000
Ppa-nhr-48 Pristionchus pacificus PPA20177 I 0.000
RPRC001794 Rhodnius prolixus RPRC001794 I 0.000
SMAR007355 Strigamia maritima SMAR007355 I 0.000
TC010645 Tribolium castaneum TC010645 I 0.000
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.000
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.000
nhr-8 Caenorhabditis elegans WBGene00003607 I 0.000
nhr-48 Caenorhabditis elegans WBGene00003638 I 0.000
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.000
YQE_04331 Dendroctonus ponderosae YQE_04331 I 0.000
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I 0.000
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I 0.000
Ocbimv22006473m.g Octopus bimaculoides Ocbimv22006473m.g I 0.000
Ocbimv22015876m.g Octopus bimaculoides Ocbimv22015876m.g I 0.000
Ocbimv22029529m.g Octopus bimaculoides Ocbimv22029529m.g I 0.000
Ocbimv22034138m.g Octopus bimaculoides Ocbimv22034138m.g I 0.000
CLEC000589 Cimex lectularius CLEC000589 I 0.000
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.000
LCUP002913 Lucilia cuprina LCUP002913 I 0.000
LDEC005794 Leptinotarsa decemlineata LDEC005794 I 0.000
Minc13296 Meloidogyne incognita Minc13296 I 0.000
Minc18589 Meloidogyne incognita Minc18589 I 0.000
AALB008395 Anopheles albimanus AALB008395 I 0.000
AARA011580 Anopheles arabiensis AARA011580 I 0.000
AATE006049 Anopheles atroparvus AATE006049 I 0.000
ACOM033140 Anopheles coluzzii ACOM033140 I 0.000
ACUA008166 Anopheles culicifacies ACUA008166 I 0.000
ADIR005534 Anopheles dirus ADIR005534 I 0.000
AEPI000232 Anopheles epiroticus AEPI000232 I 0.000
AFAF019254 Anopheles farauti AFAF019254 I 0.000
AFUN010189 Anopheles funestus AFUN010189 I 0.000
AMAM022585 Anopheles maculatus AMAM022585 I 0.000
AMEC016766 Anopheles melas AMEC016766 I 0.000
AMEM008752 Anopheles merus AMEM008752 I 0.000
AMIN004130 Anopheles minimus AMIN004130 I 0.000
AQUA008824 Anopheles quadriannulatus AQUA008824 I 0.000
ASIS011648 Anopheles sinensis ASIS011648 I 0.000
ASTEI03690 Anopheles stephensi ASTEI03690 I 0.000
BGLB005044 Biomphalaria glabrata BGLB005044 I 0.000
BGLB005077 Biomphalaria glabrata BGLB005077 I 0.000
MDOA002084 Musca domestica MDOA002084 I 0.000
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.000
ACAC_0000565201 Angiostrongylus cantonensis ACAC_0000565201 I 0.000
ACAC_0001358501 Angiostrongylus cantonensis ACAC_0001358501 I 0.000
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.000
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.000
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I 0.000
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I 0.000
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.000
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.000
ASU_07898 Ascaris suum ASU_07898 I 0.000
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.000
BXY_1432000 Bursaphelenchus xylophilus BXY_1432000 I 0.000
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I 0.000
DICVIV_03942 Dictyocaulus viviparus DICVIV_03942 I 0.000
DME_0000702701 Dracunculus medinensis DME_0000702701 I 0.000
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.000
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I 0.000
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.000
HCOI01526000 Haemonchus contortus HCOI01526000 I 0.000
HPBE_0002060301 Heligmosomoides bakeri HPBE_0002060301 I 0.000
HPLM_0001602501 Haemonchus placei HPLM_0001602501 I 0.000
L596_g25556 Steinernema carpocapsae L596_g25556 I 0.000
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.000
L596_g9326 Steinernema carpocapsae L596_g9326 I 0.000
L889_g10853 Steinernema feltiae L889_g10853 I 0.000
L889_g7248 Steinernema feltiae L889_g7248 I 0.000
L892_g14860 Steinernema scapterisci L892_g14860 I 0.000
L892_g18386 Steinernema scapterisci L892_g18386 I 0.000
L892_g26350 Steinernema scapterisci L892_g26350 I 0.000
L893_g16225 Steinernema glaseri L893_g16225 I 0.000
L893_g3995 Steinernema glaseri L893_g3995 I 0.000
L893_g8292 Steinernema glaseri L893_g8292 I 0.000
L898_g10498 Steinernema monticolum L898_g10498 I 0.000
L898_g1817 Steinernema monticolum L898_g1817 I 0.000
L898_g23217 Steinernema monticolum L898_g23217 I 0.000
MhA1_Contig1158.frz3.gene18 Meloidogyne hapla MhA1_Contig1158.frz3.gene18 I 0.000
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I 0.000
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I 0.000
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.000
NECAME_01947 Necator americanus NECAME_01947 I 0.000
OFLC_0000598101 Onchocerca flexuosa OFLC_0000598101 I 0.000
PTRK_0001132000 Parastrongyloides trichosuri PTRK_0001132000 I 0.000
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.000
RSKR_0000789200 Rhabditophanes kr3021 RSKR_0000789200 I 0.000
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I 0.000
scaffold1545-EXSNAP2012.2 Pristionchus exspectatus scaffold1545-EXSNAP2012.2 I 0.000
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.000
scaffold889-EXSNAP2012.10 Pristionchus exspectatus scaffold889-EXSNAP2012.10 I 0.000
SMUV_0000312501 Syphacia muris SMUV_0000312501 I 0.000
SMUV_0000920301 Syphacia muris SMUV_0000920301 I 0.000
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.000
SPAL_0000150000 Strongyloides papillosus SPAL_0000150000 I 0.000
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.000
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.000
SSTP_0001272200 Strongyloides stercoralis SSTP_0001272200 I 0.000
SVE_0958300 Strongyloides venezuelensis SVE_0958300 I 0.000
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.000
SVUK_0001112701 Strongylus vulgaris SVUK_0001112701 I 0.000
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.000
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I 0.000
TELCIR_04889 Teladorsagia circumcincta TELCIR_04889 I 0.000
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.000