CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPODL_00954
(
Ogataea parapolymorpha
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
HPODL_00954
T240953_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SFL1
M01556_2.00
Saccharomyces cerevisiae
NNTYCTTCTWNN
NNWAGAAGRANN
PBM
Zhu et al.(2009)
Sfl1
0.334
0.568
SFL1
M08585_2.00
Saccharomyces cerevisiae
GAAGCTTC
GAAGCTTC
Misc
DeBoer et al.(2011)
YOR140W_605
0.334
0.568
SFL1
M08586_2.00
Saccharomyces cerevisiae
WHWHNDWYCTTCBRTNHDNDN
NHNHDNAYVGAAGRWHNDWDW
Misc
DeBoer et al.(2011)
YOR140W_839
0.334
0.568
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESX00069
HSF
30
151
FIHKLYAMLEDHNLDHLIWWHSNQTSFYVLPSEEFTRVLSNYFKHANIASFIRQLNMYGFHKVNDNFNNETLTTTPPPSDQTGSRKGSNSSNNSSYVWEFKHSSGWFRQGNIEGLTQIKRRS
Links
Other
HSF
family TFs
Other
Ogataea parapolymorpha
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL27
Arabidopsis thaliana
AT2G45160
N
SCL22
Arabidopsis thaliana
AT3G60630
N
Bo3g037600
Brassica oleracea
Bo3g037600
N
Bo4g104900
Brassica oleracea
Bo4g104900
N
Bo6g074360
Brassica oleracea
Bo6g074360
N
Bra000375
Brassica rapa
Bra000375
N
Bra003311
Brassica rapa
Bra003311
N
HAM1
Arabidopsis lyrata
fgenesh2_kg.4__2711__AT2G45160.1
N
HAM2
Arabidopsis lyrata
fgenesh2_kg.5__2529__AT3G60630.1
N
Bostr.13158s0062
Boechera stricta
Bostr.13158s0062
N
Bostr.25993s0258
Boechera stricta
Bostr.25993s0258
N
Cagra.0239s0069
Capsella grandiflora
Cagra.0239s0069
N
Cagra.6011s0009
Capsella grandiflora
Cagra.6011s0009
N
Carubv10024743m.g
Capsella rubella
Carubv10024743m.g
N
Thhalv10001784m.g
Eutrema salsugineum
Thhalv10001784m.g
N
Thhalv10006506m.g
Eutrema salsugineum
Thhalv10006506m.g
N