IRF2 (Cavia porcellus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCPOG00000013097 T243988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.981 0.981
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.981 0.981
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.981 0.981
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.981 0.981
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.981 0.981
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.981 0.981
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.981 0.981
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.962 0.962
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.962 0.962
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		0.781 0.781
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		0.781 0.781
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		0.781 0.781
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		0.781 0.781
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		0.781 0.781
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		0.781 0.781
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		0.781 0.781
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000011789 IRF 7 113

Links

Other IRF family TFs
Other Cavia porcellus TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I
Pm002704 Prunus mume Pm002704 I
29846.m000184 Ricinus communis 29846.m000184 I
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I
Lus10024394.g Linum usitatissimum Lus10024394.g I
Lus10025351.g Linum usitatissimum Lus10025351.g I
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I
PK11664.1 Cannabis sativa PK11664.1 I
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I
LPERR01G31650 Leersia perrieri LPERR01G31650 I
Bo1g144510 Brassica oleracea Bo1g144510 I
Bo5g139340 Brassica oleracea Bo5g139340 I
Bra029762 Brassica rapa Bra029762 I
Bra034067 Brassica rapa Bra034067 I
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I
GLYMA07G15820 Glycine max GLYMA07G15820 I
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I
TCM_021936 Theobroma cacao TCM_021936 I
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I
Bo3g062020 Brassica oleracea Bo3g062020 N