ENSPSIG00000011619 (Pelodiscus sinensis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPSIG00000011619 T244342_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		1.000 1.000
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		1.000 1.000
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		1.000 1.000
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		1.000 1.000
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		1.000 1.000
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		1.000 1.000
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		1.000 1.000
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		1.000 1.000
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		1.000 1.000
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		1.000 1.000
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		1.000 1.000
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.990 0.990
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.990 0.990
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.810 0.810
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.810 0.810
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.810 0.810
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.810 0.810
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.810 0.810
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.810 0.810
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.810 0.810
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.810 0.810
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.810 0.810
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000012980 IRF 19 124

Links

Other IRF family TFs
Other Pelodiscus sinensis TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRHL2 Homo sapiens ENSG00000083307 D 0.000
GRHL1 Homo sapiens ENSG00000134317 D 0.000
Grhl2 Mus musculus ENSMUSG00000022286 D 0.000
GRHL1 Anolis carolinensis ENSACAG00000000132 I 0.000
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.000
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.000
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.000
GRHL2 Bos taurus ENSBTAG00000004518 I 0.000
GRHL1 Bos taurus ENSBTAG00000007485 I 0.000
GRHL2 Canis familiaris ENSCAFG00000000587 I 0.000
GRHL1 Canis familiaris ENSCAFG00000003394 I 0.000
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.000
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.000
GRHL2 Cavia porcellus ENSCPOG00000005630 I 0.000
GRHL1 Cavia porcellus ENSCPOG00000010783 I 0.000
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.000
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.000
grhl1 Danio rerio ENSDARG00000061391 I 0.000
grhl2b Danio rerio ENSDARG00000061974 I 0.000
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.000
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.000
GRHL2 Equus caballus ENSECAG00000013681 I 0.000
GRHL1 Equus caballus ENSECAG00000015969 I 0.000
ENSFALG00000005879 Ficedula albicollis ENSFALG00000005879 I 0.000
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 0.000
GRHL2 Felis catus ENSFCAG00000004963 I 0.000
GRHL1 Felis catus ENSFCAG00000007856 I 0.000
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I 0.000
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.000
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.000
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.000
GRHL2 Gorilla gorilla ENSGGOG00000004401 I 0.000
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.000
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.000
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.000
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.000
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.000
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.000
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.000
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.000
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.000
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.000
GRHL2 Macaca mulatta ENSMMUG00000020995 I 0.000
GRHL2 Monodelphis domestica ENSMODG00000006048 I 0.000
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.000
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.000
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.000
Grhl1 Mus musculus ENSMUSG00000020656 I 0.000
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.000
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.000
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.000
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.000
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I 0.000
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.000
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I 0.000
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.000
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.000
GRHL1 Otolemur garnettii ENSOGAG00000014342 I 0.000
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.000
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.000
grhl1 Oryzias latipes ENSORLG00000015232 I 0.000
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.000
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.000
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I 0.000
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.000
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I 0.000
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.000
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I 0.000
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.000
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.000
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.000
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.000
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.000
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.000
Grhl1 Rattus norvegicus ENSRNOG00000054989 I 0.000
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.000
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.000
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.000
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I 0.000
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.000
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.000
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.000
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I 0.000
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.000
ENSTSYG00000004124 Tarsius syrichta ENSTSYG00000004124 I 0.000
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.000
GRHL1 Vicugna pacos ENSVPAG00000010842 I 0.000
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.000
Aan_R003923 Calypte anna Aan_R003923 I 0.000
Aan_R015393 Calypte anna Aan_R015393 I 0.000
Afo_R002230 Aptenodytes forsteri Afo_R002230 I 0.000
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.000
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I 0.000
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.000
Brh_R013325 Buceros rhinoceros Brh_R013325 I 0.000
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.000
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.000
ENSP00000379261 Macaca fascicularis ENSP00000379261 I 0.000
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I 0.000
Gfo_R006019 Geospiza fortis Gfo_R006019 I 0.000
Gfo_R015266 Geospiza fortis Gfo_R015266 I 0.000
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.000
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.000
Ogr04284 Ophisaurus gracilis Ogr04284 I 0.000
Pvit_03833 Pogona vitticeps Pvit_03833 I 0.000
Pvit_14440 Pogona vitticeps Pvit_14440 I 0.000
Tal_R012680 Tyto alba Tal_R012680 I 0.000
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.000
grhl1.L Xenopus laevis XB-GENE-486580 I 0.000
XP_002938935 Xenopus tropicalis XP_002938935 I 0.000
XP_002938936 Xenopus tropicalis XP_002938936 I 0.000