PGSC0003DMG400014174 (Solanum tuberosum)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01698 (FLO_LFY) IPR002910 PGSC0003DMG400014174 T244733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.880 0.880
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.880 0.880
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400036749 Leafy 1 108

Links

Other Leafy family TFs
Other Solanum tuberosum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.870
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.880
mgf013601m Mimulus guttatus mgf013601m I 0.935
Aquca_043_00044 Aquilegia coerulea Aquca_043_00044 I 0.741
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.889
Eucgr.K02192 Eucalyptus grandis Eucgr.K02192 I 0.861
gene30683-v1.0-hybrid Fragaria vesca gene30683-v1.0-hybrid I 0.759
gene30750-v1.0-hybrid Fragaria vesca gene30750-v1.0-hybrid I 0.722
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.935
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.944
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.861
Pavir.Ga00621 Panicum virgatum Pavir.Ga00621 I 0.815
Pavir.Gb00795 Panicum virgatum Pavir.Gb00795 I 0.815
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.917
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.889
chr1.CM0094.710.nd Lotus japonicus chr1.CM0094.710.nd I 0.713
PDK_20s1382371g001 Phoenix dactylifera PDK_20s1382371g001 I 0.741
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.907
Bo2g161690 Brassica oleracea Bo2g161690 I 0.889
Bo3g109270 Brassica oleracea Bo3g109270 I 0.870
Bra029305 Brassica rapa Bra029305 I 0.889
BRADI5G20340 Brachypodium distachyon BRADI5G20340 I 0.806
F775_25468 Aegilops tauschii F775_25468 I 0.824
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.917
GRMZM2G098813 Zea mays GRMZM2G098813 I 0.815
LPERR04G19570 Leersia perrieri LPERR04G19570 I 0.731
AMTR_s00016p00083040 Amborella trichopoda AMTR_s00016p00083040 I 0.778
OB04G30790 Oryza brachyantha OB04G30790 I 0.815
FL Populus trichocarpa POPTR_0015s11820 I 0.917
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.981
TCM_014768 Theobroma cacao TCM_014768 I 0.944
Traes_2AL_83D0D0C3F Triticum aestivum Traes_2AL_83D0D0C3F I 0.824
Traes_2BL_8DEC0EFBF Triticum aestivum Traes_2BL_8DEC0EFBF I 0.824
LFY Vitis vinifera VIT_17s0000g00150 I 0.954