gene30683-v1.0-hybrid (Fragaria vesca)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 gene30683-v1.0-hybrid T244786_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR

YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.762 0.762
LFY
M10895_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30683.1-v1.0-hybrid Leafy 1 370

Links

Other Leafy family TFs
Other Fragaria vesca TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gene33406-v1.0-hybrid Fragaria vesca gene33406-v1.0-hybrid I 0.857
gene30750-v1.0-hybrid Fragaria vesca gene30750-v1.0-hybrid I 0.827
gene30747-v1.0-hybrid Fragaria vesca gene30747-v1.0-hybrid I 0.823
mgf013601m Mimulus guttatus mgf013601m I 0.810
chr1.CM0094.750.nd Lotus japonicus chr1.CM0094.750.nd I 0.803
Ca_01386 Cicer arietinum Ca_01386 I 0.792
30147.m014401 Ricinus communis 30147.m014401 I 0.786
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.786
TCM_014768 Theobroma cacao TCM_014768 I 0.786
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.786
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.786
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.780
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.780
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.774
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.774
Carubv10028602m.g Capsella rubella Carubv10028602m.g I 0.768
Cagra.4553s0022 Capsella grandiflora Cagra.4553s0022 I 0.768
cassava19992.m1 Manihot esculenta cassava19992.m1 I 0.768
LFY Vitis vinifera VIT_17s0000g00150 I 0.768
mgf020579m Mimulus guttatus mgf020579m I 0.768
Bra019619 Brassica rapa Bra019619 I 0.768
LFY Arabidopsis lyrata Al_scaffold_0008_2690 I 0.768
Bo3g109270 Brassica oleracea Bo3g109270 I 0.768
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.768
LFY Arabidopsis thaliana AT5G61850 D 0.762
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.762
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.762
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.762
Cla019619 Citrullus lanatus Cla019619 I 0.762
PGSC0003DMG400014174 Solanum tuberosum PGSC0003DMG400014174 I 0.759
FL Populus trichocarpa POPTR_0015s11820 I 0.756
PRUPE_ppa006372mg Prunus persica PRUPE_ppa006372mg I 0.756
Bra029305 Brassica rapa Bra029305 I 0.756
Bo2g161690 Brassica oleracea Bo2g161690 I 0.756
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.750
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.750
Sb06g027340 Sorghum bicolor Sb06g027340 I 0.744
GRMZM2G180190 Zea mays GRMZM2G180190 I 0.744
Eucgr.K02192 Eucalyptus grandis Eucgr.K02192 I 0.738
Pavir.Ga00621 Panicum virgatum Pavir.Ga00621 I 0.732
GSMUA_Achr6G16390_001 Musa acuminata GSMUA_Achr6G16390_001 I 0.732
GRMZM2G098813 Zea mays GRMZM2G098813 I 0.732
Pavir.Gb00795 Panicum virgatum Pavir.Gb00795 I 0.726
Aquca_043_00044 Aquilegia coerulea Aquca_043_00044 I 0.726
Si011756m.g Setaria italica Si011756m.g I 0.722
OSL Oryza indica BGIOSGA014428 I 0.720
OBART04G23870 Oryza barthii OBART04G23870 I 0.720
OGLUM04G23830 Oryza glumaepatula OGLUM04G23830 I 0.720
OLONG_021167 Oryza longistaminata OLONG_021167 I 0.720
ORUFI04G25610 Oryza rufipogon ORUFI04G25610 I 0.720
OMERI04G19760 Oryza meridionalis OMERI04G19760 I 0.720
ORGLA04G0204600 Oryza glaberrima ORGLA04G0204600 I 0.720
FL Oryza sativa OS04G0598300 I 0.720
OPUNC04G21410 Oryza punctata OPUNC04G21410 I 0.720
ONIVA04G23030 Oryza nivara ONIVA04G23030 I 0.720
Traes_2BL_8DEC0EFBF Triticum aestivum Traes_2BL_8DEC0EFBF I 0.714
OB04G30790 Oryza brachyantha OB04G30790 I 0.714
BRADI5G20340 Brachypodium distachyon BRADI5G20340 I 0.714
Traes_2AL_83D0D0C3F Triticum aestivum Traes_2AL_83D0D0C3F I 0.714
GLYMA04G37900 Glycine max GLYMA04G37900 I 0.710