estExt_fgenesh1_pg.C_740147 (Physcomitrella patens)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 estExt_fgenesh1_pg.C_740147 T244771_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.702 0.702
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_740147 Leafy 6 348

Links

Other Leafy family TFs
Other Physcomitrella patens TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMU15000328 Schmidtea mediterranea SMU15000328 I
Smp_036500 Schistosoma mansoni Smp_036500 N
ECANG7_04955 Echinococcus canadensis ECANG7_04955 N
HmN_000662400 Hymenolepis microstoma HmN_000662400 N
HNAJ_0001018501 Hymenolepis nana HNAJ_0001018501 N
MCOS_0000023701 Mesocestoides corti MCOS_0000023701 N
SMRZ_0000423901 Schistosoma margrebowiei SMRZ_0000423901 N
TASK_0000026001 Taenia asiatica TASK_0000026001 N
TsM_000945100 Taenia solium TsM_000945100 N
TTAC_0000068601 Hydatigera taeniaeformis TTAC_0000068601 N