Ca_12464 (Cicer arietinum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ca_12464 T246305_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_12464 LOB 25 123

Links

Other LOB family TFs
Other Cicer arietinum TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.869
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.838
mgf019866m Mimulus guttatus mgf019866m N 0.808
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.788
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.788
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.788
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.859
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.859
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.909
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.828
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.899
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.848
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.869
MDP0000220708 Malus domestica MDP0000220708 N 0.818
MDP0000943252 Malus domestica MDP0000943252 N 0.808
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.859
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.879
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.859
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.778
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.879
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.788
Bo5g136860 Brassica oleracea Bo5g136860 N 0.778
Bra034867 Brassica rapa Bra034867 N 0.778
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.788
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.939
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.929
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.939
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.939
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.859
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.970
LBD21 Arabidopsis thaliana AT3G11090 N 0.788
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.879
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.899
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.848
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.788
TCM_042466 Theobroma cacao TCM_042466 N 0.899
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.899
Pm018957 Prunus mume Pm018957 N 0.848
29814.m000742 Ricinus communis 29814.m000742 N 0.899
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.859