Thhalv10015772m.g (Eutrema salsugineum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Thhalv10015772m.g T247344_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015772m LOB 7 103

Links

Other LOB family TFs
Other Eutrema salsugineum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.719
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.750
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.719
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.729
TCM_042730 Theobroma cacao TCM_042730 I 0.717
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.719
Ca_16122 Cicer arietinum Ca_16122 N 0.708
MDP0000123797 Malus domestica MDP0000123797 N 0.708
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.823
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.823
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.798
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.707
30143.m001171 Ricinus communis 30143.m001171 N 0.707
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.844
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.750
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.719
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.740
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.719
Bra009161 Brassica rapa Bra009161 N 0.828
Bo9g176580 Brassica oleracea Bo9g176580 N 0.854
LBD33 Arabidopsis thaliana AT5G06080 N 0.823