cassava34632.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava34632.m1 T246466_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34632.m1 LOB 4 103

Links

Other LOB family TFs
Other Manihot esculenta TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30143.m001171 Ricinus communis 30143.m001171 N 0.889
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.869
TCM_042730 Theobroma cacao TCM_042730 I 0.869
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.859
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.859
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.848
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.848
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.848
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.838
Ca_16122 Cicer arietinum Ca_16122 N 0.838
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.828
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.818
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.818
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.808
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.808
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.798
Pm018835 Prunus mume Pm018835 N 0.798
MDP0000123797 Malus domestica MDP0000123797 N 0.798
MDP0000133936 Malus domestica MDP0000133936 N 0.798
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.788
Cla004059 Citrullus lanatus Cla004059 N 0.778
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.768
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.768
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.768
LBD33 Arabidopsis thaliana AT5G06080 N 0.758
Bo9g176580 Brassica oleracea Bo9g176580 N 0.758
Bra009161 Brassica rapa Bra009161 N 0.758
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.758
Aquca_003_00139 Aquilegia coerulea Aquca_003_00139 N 0.747
Lus10004707.g Linum usitatissimum Lus10004707.g N 0.747
Lus10040274.g Linum usitatissimum Lus10040274.g N 0.747
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.737
Ca_12214 Cicer arietinum Ca_12214 I 0.737
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.737
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.737
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.737
LBD29 Arabidopsis thaliana AT3G58190 I 0.727
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.727
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.727
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.727
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.727
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.727
28428.m000040 Ricinus communis 28428.m000040 I 0.727
mgf020773m Mimulus guttatus mgf020773m I 0.727
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.727
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.727
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.727
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.727
TCM_004103 Theobroma cacao TCM_004103 I 0.726
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.717
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.717
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.717
Ca_07763 Cicer arietinum Ca_07763 I 0.717
Cla006087 Citrullus lanatus Cla006087 I 0.717
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.717
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.717
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.717
mgf020558m Mimulus guttatus mgf020558m N 0.717
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.717
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.717
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.717
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.717
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.717
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.717
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.717
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.717
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.717
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.717
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I 0.717
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.707
Bo4g108600 Brassica oleracea Bo4g108600 I 0.707
Bo8g092560 Brassica oleracea Bo8g092560 I 0.707
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.707
GLYMA03G31860 Glycine max GLYMA03G31860 I 0.707
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.707
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.707
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.707
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.707
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.707
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.707
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.707
OB03G13890 Oryza brachyantha OB03G13890 I 0.707
OBART03G03830 Oryza barthii OBART03G03830 I 0.707
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.707
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.707
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.707
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.707
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.707
OS03G0149100 Oryza sativa OS03G0149100 I 0.707
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.707
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.707
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.707
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.707
Si040019m.g Setaria italica Si040019m.g I 0.707
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.707
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.707
Cla007068 Citrullus lanatus Cla007068 I 0.707
Cla021625 Citrullus lanatus Cla021625 I 0.707
Pm017936 Prunus mume Pm017936 I 0.707
Pm020627 Prunus mume Pm020627 I 0.707
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.707
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.707
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.707
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.707
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.707
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.707
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.707
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N 0.707