Cucsa.165150 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.165150 T246508_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.165150.1 LOB 12 111

Links

Other LOB family TFs
Other Cucumis sativus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla004059 Citrullus lanatus Cla004059 N 0.980
TCM_042730 Theobroma cacao TCM_042730 I 0.818
PK00972.1 Cannabis sativa PK00972.1 I 0.800
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.798
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.798
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.788
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.788
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.788
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.788
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.788
LBD33 Arabidopsis thaliana AT5G06080 N 0.778
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.778
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.778
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.778
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.778
Ca_16122 Cicer arietinum Ca_16122 N 0.778
30143.m001171 Ricinus communis 30143.m001171 N 0.768
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.758
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.758
Bra009161 Brassica rapa Bra009161 N 0.758
Bo9g176580 Brassica oleracea Bo9g176580 N 0.758
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.755
MDP0000133936 Malus domestica MDP0000133936 N 0.747
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.747
MDP0000123797 Malus domestica MDP0000123797 N 0.747
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.737
Pm018835 Prunus mume Pm018835 N 0.737
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.737
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.727
Lus10040274.g Linum usitatissimum Lus10040274.g N 0.701