chr6.LjB02K20.190.nd (Lotus japonicus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 chr6.LjB02K20.190.nd T247433_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr6.LjB02K20.190.nd LOB 11 109

Links

Other LOB family TFs
Other Lotus japonicus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.848
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.889
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.848
mgf019866m Mimulus guttatus mgf019866m N 0.828
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.808
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.808
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.808
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.859
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.879
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.909
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.859
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.879
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.859
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.879
MDP0000220708 Malus domestica MDP0000220708 N 0.818
MDP0000943252 Malus domestica MDP0000943252 N 0.798
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.859
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.899
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.869
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.798
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.798
Bo5g136860 Brassica oleracea Bo5g136860 N 0.778
Bra034867 Brassica rapa Bra034867 N 0.778
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.808
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.919
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.929
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.919
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.939
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.879
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.909
LBD21 Arabidopsis thaliana AT3G11090 N 0.808
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.899
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.909
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.848
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.798
TCM_042466 Theobroma cacao TCM_042466 N 0.899
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.909
Ca_12464 Cicer arietinum Ca_12464 N 0.879
Pm018957 Prunus mume Pm018957 N 0.848
29814.m000742 Ricinus communis 29814.m000742 N 0.889