CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra001951
(
Brassica rapa
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
Bra001951
T248008_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra001951.1-P
MADF
101
176
VWGDRFLQLGRRSLRNEDWNEVAEKVSEELRSERSETQCRRMVDNLKRKYKKERVKVDKLGLGSSKWSFFNKMDML
Links
Other
MADF
family TFs
Other
Brassica rapa
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s09790
Populus trichocarpa
POPTR_0005s09790
N
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
TCM_033446
Theobroma cacao
TCM_033446
N
VIT_19s0085g00540
Vitis vinifera
VIT_19s0085g00540
N
Pm011106
Prunus mume
Pm011106
N
30169.m006306
Ricinus communis
30169.m006306
N
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
evm.TU.supercontig_34.30
Carica papaya
evm.TU.supercontig_34.30
N
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
Gorai.002G110100
Gossypium raimondii
Gorai.002G110100
N
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
PK21020.1
Cannabis sativa
PK21020.1
N