CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_19s0085g00540
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_19s0085g00540
T201854_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_19s0085g00540.t01
GRAS
152
523
LVHSLLACAEAVGCRDTQLADSMLSRIWRSANCYGDSLQRVSYCFAMGLKSRLLHLRNVNANGTFANGRMAVSSINKEEKMEAFQLLHQTTPYIAFGFMAANEAILKTGKGNDSLHIIDLGMEHCLQWPSLIRTLAQEPEGPPKLRITGLVKDGDSLSGLKASLKELAEYAATMGVPLQLNTVSDPATPAFLTKESLDVREGEVLFVNSIMHLHKYVKESRGSLKAVLQAIKKLGPTLVTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRSSPQRMKIERGHFGEEIRNIVAFEGSERIERHERADQWRRQLGRAGFQVVGMKSMSQARMMLSVYGCDGYSLACEKGCLLLGWKGKPIMLASAWQ
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK21020.1
Cannabis sativa
PK21020.1
N
0.800
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
0.773
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
0.773
TCM_033446
Theobroma cacao
TCM_033446
N
0.768
evm.TU.supercontig_34.30
Carica papaya
evm.TU.supercontig_34.30
N
0.746
POPTR_0005s09790
Populus trichocarpa
POPTR_0005s09790
N
0.746
Pm011106
Prunus mume
Pm011106
N
0.738
Gorai.002G110100
Gossypium raimondii
Gorai.002G110100
N
0.738
SapurV1A.0404s0280
Salix purpurea
SapurV1A.0404s0280
N
0.732
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
0.730
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
0.726
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
0.721
30169.m006306
Ricinus communis
30169.m006306
N
0.721
Eucgr.F04460
Eucalyptus grandis
Eucgr.F04460
N
0.719
PDK_20s1507561g001
Phoenix dactylifera
PDK_20s1507561g001
N
0.702