CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0404s0280
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0404s0280
T203153_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0404s0280.1.p
GRAS
157
528
LLHLLLACAEALGCRDTRLAETMLGQIWPSVSPWGDSLQRVSYCFAMGLKCRLSHLNNVNANGTFTNGGAMDRSLIIREEKMEAFHLLHQKTPYIAFGFMAANEAICQAAQEKDTLHIIDLGMEHALQWPSLMRALASRPEGPPKLRITGLTDEHNLSELETSMKELAEEASSLGIRLEFNMISDPVTPLLLTAENLKLREGEALFFNSIMHLHRFVKESRGSLKAILQAIKRLNPALLTVVEQDANHNGPFFLGRFIESLHYYSAILDSLEASLPRNSPQRMKIEKVKFCKEICNIIAYEGCNRTERHERVDRWRRQLSRAGFQVMGLKCMSQARVMLSVYGIDGYTLATEKGCLLLGWKGRPIMLASAWQ
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s09790
Populus trichocarpa
POPTR_0005s09790
N
0.896
TCM_033446
Theobroma cacao
TCM_033446
N
0.781
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
0.770
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
0.770
Pm011106
Prunus mume
Pm011106
N
0.767
Gorai.002G110100
Gossypium raimondii
Gorai.002G110100
N
0.765
30169.m006306
Ricinus communis
30169.m006306
N
0.762
evm.TU.supercontig_34.30
Carica papaya
evm.TU.supercontig_34.30
N
0.762
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
0.757
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
0.755
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
0.749
VIT_19s0085g00540
Vitis vinifera
VIT_19s0085g00540
N
0.732
PK21020.1
Cannabis sativa
PK21020.1
N
0.729
Lus10031748.g
Linum usitatissimum
Lus10031748.g
N
0.723
MTR_8g442410
Medicago truncatula
MTR_8g442410
N
0.710
Eucgr.F04460
Eucalyptus grandis
Eucgr.F04460
N
0.701