CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1507561g001
(
Phoenix dactylifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
PDK_20s1507561g001
T203345_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1507561g001
GRAS
80
451
LVHLLLACAEAVGCRDARLAASTLHRIWTFANPCGDSLQRVSFCFAMGLQSRLSLLRNIGTNGSLTGAVTTDGPLVTREEKMEGFRLLYQTTPYIAFGFMAANEAICQAARGKDYLHIIDLGMEHTLQWPSLIRTLVSRSEGPPKLLRITGICSAMFSDLPELESSMRAITNEANALGMPVEFRALEEAPSPLLPNLDQRQGEVVFVNSIMHLHKYVRESRGSLKAILTAIKKLNPALVTVVEQDANHNGPFFLARFLESLHYYSAIFDSLEASLPRASTQRLKIEKCHFAEEIRNIVAYEGCDRVARHERADQWRRQLGRAGFQVVGLKSTSQARMLLSVYGCEGYTLASEKGCLLLGWNGRPIMWASAWQ
Links
Other
GRAS
family TFs
Other
Phoenix dactylifera
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK21020.1
Cannabis sativa
PK21020.1
N
0.786
TCM_033446
Theobroma cacao
TCM_033446
N
0.746
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
0.740
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
0.740
Gorai.002G110100
Gossypium raimondii
Gorai.002G110100
N
0.730
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
0.726
evm.TU.supercontig_34.30
Carica papaya
evm.TU.supercontig_34.30
N
0.719
Pm011106
Prunus mume
Pm011106
N
0.717
30169.m006306
Ricinus communis
30169.m006306
N
0.717
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
0.714
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
0.711
POPTR_0005s09790
Populus trichocarpa
POPTR_0005s09790
N
0.702
VIT_19s0085g00540
Vitis vinifera
VIT_19s0085g00540
N
0.702