OBART10G15720 (Oryza barthii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OBART10G15720 T249538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26075.1
M01265_2.00 		Cannabis sativa
NNRGTDANWN
NWNTHACYNN		 PBM
Lambert et al.(2019)
pTH11260 		0.916 0.841
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.824 0.478
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.824 0.478
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART10G15720.1 MADF 109 180

Links

Other MADF family TFs
Other Oryza barthii TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK26075.1 Cannabis sativa PK26075.1 D 0.916
OS02G0104500 Oryza sativa OS02G0104500 D 0.824
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.824
Pavir.Aa01102 Panicum virgatum Pavir.Aa01102 I 0.890
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.828
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.828
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.816
Traes_6DL_09329CC5D Triticum aestivum Traes_6DL_09329CC5D I 0.906
Traes_4DL_64E445D4A Triticum aestivum Traes_4DL_64E445D4A I 0.859
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I 0.961
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.824
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.824
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.824
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.824
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.824
OLONG_007248 Oryza longistaminata OLONG_007248 I 0.868
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.824
OBART02G00380 Oryza barthii OBART02G00380 I 0.824
OB02G10400 Oryza brachyantha OB02G10400 I 0.830
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.812
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.823
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.828
PGSC0003DMG400013300 Solanum tuberosum PGSC0003DMG400013300 N 0.818
Solyc11g012720.1 Solanum lycopersicum Solyc11g012720.1 N 0.818