OGLUM02G00360 (Oryza glumaepatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OGLUM02G00360 T249542_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.971 1.000
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.971 1.000
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.873 0.716
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G00360.1 MADF 543 612

Links

Other MADF family TFs
Other Oryza glumaepatula TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.971
OBART02G00380 Oryza barthii OBART02G00380 I 0.971
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.971
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.971
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.971
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.971
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.971
OS02G0104500 Oryza sativa OS02G0104500 D 0.971
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.969
OB02G10400 Oryza brachyantha OB02G10400 I 0.965
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.964
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.960
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.960
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.960
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.960
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.950
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.949
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.949
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.948
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.948
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.948
29739.m003611 Ricinus communis 29739.m003611 I 0.944
Si033157m.g Setaria italica Si033157m.g I 0.942
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.939
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.937
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.937
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.937
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.931
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.930
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.930
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.930
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.929
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.921
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.921
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.920
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.910
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.906
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.906
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.905
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.904
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.898
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.897
MDP0000122269 Malus domestica MDP0000122269 I 0.897
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.896
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.896
TCM_037381 Theobroma cacao TCM_037381 I 0.895
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.887
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.887
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.886
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.885
Bo6g083670 Brassica oleracea Bo6g083670 I 0.879
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.879
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.878
PK14727.1 Cannabis sativa PK14727.1 I 0.878
PK15172.1 Cannabis sativa PK15172.1 D 0.873
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.870
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.870
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.864
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I 0.863
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.863
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.863
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.857
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.849
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.846
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.841
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.837
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.836
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.835
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.826
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.826
OBART10G15720 Oryza barthii OBART10G15720 I 0.824