CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_021_00219
(
Aquilegia coerulea
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Aquca_021_00219
T250573_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.846
0.649
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.846
0.649
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_021_00219.1
MADF
44
126
EAWGERHLELNRGNLRQKHWQEVADAVNDRHGSSIKKARRTDVQCKNRIDTLKKKYKVEKAKILASSGTFISKWPFYSRLDML
Links
Other
MADF
family TFs
Other
Aquilegia coerulea
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC010
Arabidopsis thaliana
AT1G28470
D
0.000
AMTR_s00060p00054700
Amborella trichopoda
AMTR_s00060p00054700
I
0.000
anac085
Arabidopsis thaliana
AT5G14490
I
0.000
Bo5g055990
Brassica oleracea
Bo5g055990
I
0.000
Bra006257
Brassica rapa
Bra006257
I
0.000
Bra032910
Brassica rapa
Bra032910
I
0.000
BRADI1G43840
Brachypodium distachyon
BRADI1G43840
I
0.000
BRADI3G47627
Brachypodium distachyon
BRADI3G47627
I
0.000
F775_30638
Aegilops tauschii
F775_30638
I
0.000
GLYMA01G22510
Glycine max
GLYMA01G22510
I
0.000
GLYMA02G11140
Glycine max
GLYMA02G11140
I
0.000
GLYMA05G09110
Glycine max
GLYMA05G09110
I
0.000
GLYMA07G32250
Glycine max
GLYMA07G32250
I
0.000
GLYMA12G13710
Glycine max
GLYMA12G13710
I
0.000
GLYMA13G24320
Glycine max
GLYMA13G24320
I
0.000
GLYMA13G30800
Glycine max
GLYMA13G30800
I
0.000
GLYMA15G08480
Glycine max
GLYMA15G08480
I
0.000
GLYMA20G32690
Glycine max
GLYMA20G32690
I
0.000
GSMUA_Achr3G07330_001
Musa acuminata
GSMUA_Achr3G07330_001
I
0.000
GSMUA_Achr9G01880_001
Musa acuminata
GSMUA_Achr9G01880_001
I
0.000
GSMUA_AchrUn_randomG17050_001
Musa acuminata
GSMUA_AchrUn_randomG17050_001
I
0.000
MTR_1g093670
Medicago truncatula
MTR_1g093670
I
0.000
MTR_1g093680
Medicago truncatula
MTR_1g093680
I
0.000
MTR_2g014680
Medicago truncatula
MTR_2g014680
I
0.000
MTR_4g078875
Medicago truncatula
MTR_4g078875
I
0.000
MTR_4g088245
Medicago truncatula
MTR_4g088245
I
0.000
MTR_5g053430
Medicago truncatula
MTR_5g053430
I
0.000
MTR_8g069160
Medicago truncatula
MTR_8g069160
I
0.000
OB06G19430
Oryza brachyantha
OB06G19430
I
0.000
PGSC0003DMG400000809
Solanum tuberosum
PGSC0003DMG400000809
I
0.000
PGSC0003DMG400012607
Solanum tuberosum
PGSC0003DMG400012607
I
0.000
POPTR_0001s35490
Populus trichocarpa
POPTR_0001s35490
I
0.000
POPTR_0008s11550
Populus trichocarpa
POPTR_0008s11550
I
0.000
POPTR_0010s13980
Populus trichocarpa
POPTR_0010s13980
I
0.000
PRUPE_ppa006948mg
Prunus persica
PRUPE_ppa006948mg
I
0.000
PRUPE_ppa008828mg
Prunus persica
PRUPE_ppa008828mg
I
0.000
ANAC010
Arabidopsis lyrata
scaffold_103183.1
I
0.000
Si006639m.g
Setaria italica
Si006639m.g
I
0.000
Si017393m.g
Setaria italica
Si017393m.g
I
0.000
Solyc02g093420.2
Solanum lycopersicum
Solyc02g093420.2
I
0.000
TCM_011869
Theobroma cacao
TCM_011869
I
0.000
TCM_016984
Theobroma cacao
TCM_016984
I
0.000
TCM_029798
Theobroma cacao
TCM_029798
I
0.000
Traes_6AL_C14335DC8
Triticum aestivum
Traes_6AL_C14335DC8
I
0.000
Traes_6BL_B27806C89
Triticum aestivum
Traes_6BL_B27806C89
I
0.000
Traes_6DL_2F3586557
Triticum aestivum
Traes_6DL_2F3586557
I
0.000
Traes_7AS_6E6A5CD04
Triticum aestivum
Traes_7AS_6E6A5CD04
I
0.000
Traes_7BS_99BF8BA2F
Triticum aestivum
Traes_7BS_99BF8BA2F
I
0.000
Traes_7DS_78B5508C0
Triticum aestivum
Traes_7DS_78B5508C0
I
0.000
TRIUR3_21992
Triticum urartu
TRIUR3_21992
I
0.000
SOG1
Vitis vinifera
VIT_01s0011g02990
I
0.000
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.000
Cla004701
Citrullus lanatus
Cla004701
I
0.000
Cla020673
Citrullus lanatus
Cla020673
I
0.000
Pm010104
Prunus mume
Pm010104
I
0.000
Pm015625
Prunus mume
Pm015625
I
0.000
Pm029010
Prunus mume
Pm029010
I
0.000
29738.m001046
Ricinus communis
29738.m001046
I
0.000
29917.m002016
Ricinus communis
29917.m002016
I
0.000
cassava12330.valid.m1
Manihot esculenta
cassava12330.valid.m1
I
0.000
cassava14633.m1
Manihot esculenta
cassava14633.m1
I
0.000
cassava3690.m1
Manihot esculenta
cassava3690.m1
I
0.000
Cucsa.011210
Cucumis sativus
Cucsa.011210
I
0.000
Cucsa.046530
Cucumis sativus
Cucsa.046530
I
0.000
Cucsa.126960
Cucumis sativus
Cucsa.126960
I
0.000
Cucsa.283900
Cucumis sativus
Cucsa.283900
I
0.000
mgf012882m
Mimulus guttatus
mgf012882m
I
0.000
mgf018486m
Mimulus guttatus
mgf018486m
I
0.000
Aquca_002_01098
Aquilegia coerulea
Aquca_002_01098
I
0.000
Aquca_054_00006
Aquilegia coerulea
Aquca_054_00006
I
0.000
Bostr.2902s0186
Boechera stricta
Bostr.2902s0186
I
0.000
Bostr.7867s0691
Boechera stricta
Bostr.7867s0691
I
0.000
Cagra.1822s0012
Capsella grandiflora
Cagra.1822s0012
I
0.000
Cagra.3166s0054
Capsella grandiflora
Cagra.3166s0054
I
0.000
Carubv10002665m.g
Capsella rubella
Carubv10002665m.g
I
0.000
Carubv10009638m.g
Capsella rubella
Carubv10009638m.g
I
0.000
Ciclev10015507m.g
Citrus clementina
Ciclev10015507m.g
I
0.000
Ciclev10015976m.g
Citrus clementina
Ciclev10015976m.g
I
0.000
Eucgr.D00591
Eucalyptus grandis
Eucgr.D00591
I
0.000
Eucgr.D00592
Eucalyptus grandis
Eucgr.D00592
I
0.000
Eucgr.D00594
Eucalyptus grandis
Eucgr.D00594
I
0.000
Eucgr.E03226
Eucalyptus grandis
Eucgr.E03226
I
0.000
Eucgr.G02349
Eucalyptus grandis
Eucgr.G02349
I
0.000
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
0.000
gene03875-v1.0-hybrid
Fragaria vesca
gene03875-v1.0-hybrid
I
0.000
gene27940-v1.0-hybrid
Fragaria vesca
gene27940-v1.0-hybrid
I
0.000
Gorai.006G034600
Gossypium raimondii
Gorai.006G034600
I
0.000
Gorai.007G075300
Gossypium raimondii
Gorai.007G075300
I
0.000
Gorai.008G186300
Gossypium raimondii
Gorai.008G186300
I
0.000
Gorai.010G157600
Gossypium raimondii
Gorai.010G157600
I
0.000
Lus10021708.g
Linum usitatissimum
Lus10021708.g
I
0.000
MDP0000276278
Malus domestica
MDP0000276278
I
0.000
MDP0000309351
Malus domestica
MDP0000309351
I
0.000
MDP0000663564
Malus domestica
MDP0000663564
I
0.000
Pavir.Ab02919
Panicum virgatum
Pavir.Ab02919
I
0.000
Pavir.Da01643
Panicum virgatum
Pavir.Da01643
I
0.000
Pavir.Db01100
Panicum virgatum
Pavir.Db01100
I
0.000
SapurV1A.0079s0500
Salix purpurea
SapurV1A.0079s0500
I
0.000
SapurV1A.0304s0050
Salix purpurea
SapurV1A.0304s0050
I
0.000
SapurV1A.0716s0010
Salix purpurea
SapurV1A.0716s0010
I
0.000
SapurV1A.1388s0020
Salix purpurea
SapurV1A.1388s0020
I
0.000
SapurV1A.2846s0020
Salix purpurea
SapurV1A.2846s0020
I
0.000
Thhalv10008249m.g
Eutrema salsugineum
Thhalv10008249m.g
I
0.000
PK17141.1
Cannabis sativa
PK17141.1
I
0.000
PK25812.1
Cannabis sativa
PK25812.1
I
0.000
chr2.CM0749.410.nc
Lotus japonicus
chr2.CM0749.410.nc
I
0.000
chr3.CM0160.860.nd
Lotus japonicus
chr3.CM0160.860.nd
I
0.000
chr6.LjT04E21.30.nc
Lotus japonicus
chr6.LjT04E21.30.nc
I
0.000
PDK_20s1381351g001
Phoenix dactylifera
PDK_20s1381351g001
I
0.000
anac044
Arabidopsis lyrata
Al_scaffold_0003_51
N
0.000
anac044
Arabidopsis thaliana
AT3G01600
N
0.000
BGIOSGA006133
Oryza indica
BGIOSGA006133
N
0.000
Bra001000
Brassica rapa
Bra001000
N
0.000
GLYMA16G07501
Glycine max
GLYMA16G07501
N
0.000
GLYMA19G00640
Glycine max
GLYMA19G00640
N
0.000
GLYMA19G08510
Glycine max
GLYMA19G08510
N
0.000
GRMZM2G038073
Zea mays
GRMZM2G038073
N
0.000
GRMZM2G104078
Zea mays
GRMZM2G104078
N
0.000
LPERR02G18380
Leersia perrieri
LPERR02G18380
N
0.000
OB02G30060
Oryza brachyantha
OB02G30060
N
0.000
OBART02G22660
Oryza barthii
OBART02G22660
N
0.000
OGLUM02G22980
Oryza glumaepatula
OGLUM02G22980
N
0.000
OLONG_021848
Oryza longistaminata
OLONG_021848
N
0.000
OMERI02G22200
Oryza meridionalis
OMERI02G22200
N
0.000
ONIVA02G25300
Oryza nivara
ONIVA02G25300
N
0.000
OPUNC02G20570
Oryza punctata
OPUNC02G20570
N
0.000
ORGLA02G0193300
Oryza glaberrima
ORGLA02G0193300
N
0.000
ORUFI02G23890
Oryza rufipogon
ORUFI02G23890
N
0.000
OS02G0594800
Oryza sativa
OS02G0594800
N
0.000
Sb04g024780
Sorghum bicolor
Sb04g024780
N
0.000
Si012740m.g
Setaria italica
Si012740m.g
N
0.000
Ca_23230
Cicer arietinum
Ca_23230
N
0.000
Bostr.1460s0050
Boechera stricta
Bostr.1460s0050
N
0.000
Cagra.1561s0026
Capsella grandiflora
Cagra.1561s0026
N
0.000
Carubv10014004m.g
Capsella rubella
Carubv10014004m.g
N
0.000
Lus10003668.g
Linum usitatissimum
Lus10003668.g
N
0.000
MDP0000283975
Malus domestica
MDP0000283975
N
0.000
Thhalv10022099m.g
Eutrema salsugineum
Thhalv10022099m.g
N
0.000
chr1.CM0001.370.nd
Lotus japonicus
chr1.CM0001.370.nd
N
0.000